Bos taurus (cow): 532721
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Entry
532721 CDS
T01008
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bta01002
]
532721 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bta04121
]
532721 (USP42)
Enzymes [BR:
bta01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
532721 (USP42)
Peptidases and inhibitors [BR:
bta01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
532721 (USP42)
Ubiquitin system [BR:
bta04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
532721 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
532721
NCBI-ProteinID:
NP_001193568
Ensembl:
ENSBTAG00000000725
VGNC:
50065
UniProt:
A0AAA9TQ35
LinkDB
All DBs
Position
25:38074141..38130905
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AA seq
1325 aa
AA seq
DB search
MTIVDKASESSDPSTYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSAHSPGQSSPRPVISQRVVNSKQAASGFIGPQLPSHMMKNPPHLNGTGPLKETPSSP
MSGPSGNSSVSRTGPVSASPSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQSN
LHSNSLEHPNKPAPSSTITTSSAIQSTSSAPTPPASSKVPKQMAPREACSRPMMNGRPRL
SAGVLVPYGAESSEESDEEAKGLGQENGRGLTESACSPALDAEDGDASPHELQEPVALNG
ATGLDSDPTENGLPSDGAPCPGQPALHSEHPFPKANGLPGKLMPAPLPPLPEDKILETFK
LGSKAKGSAEETRTPGSEERPLEHPEAELEAGRSPPGDARDNLESVSNLSSKFKKASPPS
DPSIKPTKEEVSERVSAEPEEAVPSASTFCNPDKDALGDDQLLAPCDPGNLTDDQSKPSP
DVGGTLPERPQDPVAAEAAGRLSPGPSVPSEGDHEPEPLGHSGRDRGSDAEGPSKSMGVS
TDEAPSAQLDTITENRPEGPPERSSSERGEDSKAGQKAPEPCLVQEKVSSLRKVDRGHYR
SRRDRSSSGEHARESRSRTEVQHRRKRPHREHERPRPERPRPEPCALAPQPPCPSSLARS
GHHHSRSRGAPDQEWGRYHHAEGDHAWTREKYYPDRLRWERCRYHHDRSPLYPSREPRDW
RPFHAEREYERAGPYGGRPYKDHYRGRKGYELVAKERDRHRFSSPRAGMAHAPPPHPAAK
YTHDRLSFGAEDGSCDLAARFHEHDNIKSRKRRYDSLENESHVEKKAWRSLQKDPVEEPK
VKKHKKSKKKKKSKDKHRDRDSRHQQDSDLSVAHSDADLHRHKKKKKKKKRHSRKSEDFG
RDSEPRLPKAASCETVDHFRKAEGAFPLADGLPLEGAAPFCEKTKHFRMESREVRCRLSQ
CDQGD
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcaacctatcagaaccagcct
ggcagttctgaggctgtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcgttaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgaaaaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccacaaaaagttctcttcccatctgagaagatctgt
cttaagtggcagcagactcacagagtaggagctgggctccagaacttgggcaatacctgt
tttgcaaacgcagcactgcagtgtctaacttacacgccgcctctcgccaactacatgcta
tcacacgagcactccaagacatgtcatgcagaaggattttgcatgatgtgtacaatgcaa
gcacatatcacccaggcactcagtaatcctggggatgttattaaaccgatgtttgtcatt
aatgagatgcggcgcatagccaggcacttccgctttggaaaccaagaagacgcccacgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgtttgaacggcagcaataaattg
gacagacacacccaggccaccacactcgtctgccagatatttggaggctacctaagatct
agagtcaaatgtttaaattgcaaaggtgtttcagatacttttgatccctatctcgatata
actttggagataaaggctgctcagagtgtcaacaaggccttggagcagtttgtaaagccg
gaacagctcgacggagaaaactcgtacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagagattcactatacatagatcttctaatgttcttactctttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgagtatcttgatatt
cgaccgtacatgtctcaaccaaacggagagccgatcatttatgttttgtatgcagtcctg
gtacacactggttttaattgccatgctggccattacttctgctacataaaagctagcaac
ggcctctggtaccaaatgaacgactccatcgtgtctaccagtgatatcagatcggtactc
agccagcaagcttacgtcctcttttatatcaggtcccacgatgtgaaaaatggaggcgaa
cttactcattccgcccacagccccggccagtcctcgccccgcccggtcatcagtcagcgg
gttgtcaacagcaaacaggcagcctcgggattcattggcccacagctcccctcgcacatg
atgaagaacccccctcacctgaacgggacgggaccactgaaggagacgccgagcagcccc
atgtcaggccccagcgggaactccagcgtcagcaggactggtcctgtgagcgcctccccg
tctgttcagaactggtcagttaacaggccctcagttattccagaacaccccaagaaacag
aaaatcacgatcagtattcacaacaagttacctgtgcgccaaggtcagtctcagtctaac
cttcacagcaattctttggagcaccccaacaagcccgccccctcttctaccattaccact
tcttctgcaatacagtctacctcgagtgcccccacgccgcccgcctctagtaaggtccca
aagcagatggccccgagggaggcctgctccaggcccatgatgaacggcaggcccaggctg
agcgctggcgtgctggtcccctacggcgccgagtcctccgaggagtctgacgaggaggcc
aagggcctcggccaggagaacggccgcgggctgaccgagagcgcgtgctcccctgctctg
gacgctgaagacggcgacgcctccccgcacgagctccaagaacctgtggctctaaatggt
gctactggtctggacagcgacccgacggaaaacggcctgccctcggacggggccccttgc
ccaggccagcccgcgctgcactcagaacacccctttcccaaggcaaatggcctccctggg
aagttgatgcctgctcctttgccacctcttccagaagacaaaatcttagagaccttcaaa
ctcggcagcaaagccaaaggctcggcagaggagactaggacacctggctcagaggagagg
cctctggagcatccggaggcggagctggaggctggccgttcccctcccggtgatgcccgg
gacaacctggagtctgtctcgaatctcagcagcaaattcaagaaggcttcgccgccctcg
gaccccagcatcaaacctaccaaagaagaagtctctgaacgtgtttcggcagaacctgag
gaggctgtaccgagtgccagcaccttttgtaaccccgacaaggacgccctcggggacgat
cagcttttggcaccctgtgaccctgggaatttaacagacgatcagagcaaaccgtccccg
gacgtgggagggacgttaccagagcggccccaggacccggtggccgcggaagccgcaggg
aggctgagcccaggtccctctgtgccttctgagggtgaccatgagcccgagcccttgggt
cacagcggtcgggacagaggctcggatgcggagggtccctctaagagcatgggggtgtcc
acagatgaggcgccttctgcgcagctagacacgatcacagaaaaccgtcctgaggggccc
cccgagcgcagcagcagtgagagaggggaagacagtaaggccgggcagaaggccccggag
ccgtgtctggtccaggagaaggtcagcagcctgagaaaggtcgaccgaggacattaccgc
agccgaagggaccgctcgtccagtggcgagcatgcacgggagagccggagcaggaccgag
gtgcagcatcggcggaagcggccccaccgggagcacgagcggccgcggcctgagcggccc
cggccggagccctgcgccctggccccgcagcccccctgccccagctccctggccaggtca
ggccaccaccactcccggagcaggggcgcccctgaccaggagtggggccgctaccaccac
gccgagggcgaccatgcctggacccgggagaagtactacccggacaggctgcgctgggag
cgctgccggtaccatcacgacaggtcccccctgtatcccagccgggagccccgggactgg
cggcccttccacgccgagcgagagtacgagcgggccgggccctatggcggccggccttac
aaggaccactacagaggccgcaagggctacgagctggtggccaaagagagggaccggcac
cgcttcagcagcccccgggcgggcatggcccacgcgccccctccacaccctgccgccaag
tacacccacgacaggctcagcttcggggctgaagacggcagctgcgacctggccgcacgg
tttcacgaacatgacaacattaagtcacggaaacggagatacgatagcctcgagaatgag
agtcacgtagaaaagaaagcctggagaagcttacagaaggaccctgtagaggagcccaaa
gtgaagaagcacaaaaagtcgaagaagaagaagaaatccaaagacaaacaccgggaccga
gactccaggcatcagcaggattcagacctttccgtagcgcactctgacgctgacctccac
agacacaagaagaagaagaagaaaaagaagagacactcgaggaaatcagaggactttggg
cgagattcagaaccgcgcttgcccaaggcagccagctgtgagactgtggaccatttccgg
aaagccgagggcgccttccccctcgcagacggcctgccgctggagggcgcggcacccttc
tgtgagaaaaccaaacacttcaggatggagagccgggaggtcaggtgtcgtctgtcccag
tgcgaccagggtgattga
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integrated database retrieval system
