Bos taurus (cow): 533001
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Entry
533001 CDS
T01008
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
533001 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
533001 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
533001 (THOC5)
03041 Spliceosome [BR:
bta03041
]
533001 (THOC5)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
533001 (THOC5)
Spliceosome [BR:
bta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
533001 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
533001
NCBI-ProteinID:
NP_001077185
BGD-bta:
BT17648
Ensembl:
ENSBTAG00000013150
VGNC:
35841
UniProt:
A4IFQ0
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All DBs
Position
17:complement(68701003..68731782)
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AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRTRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDAAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSNMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKMLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVLLDLKCKDDSVL
HLTFYYLMNLNIMTVKARVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVITDHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCHYLFPAKVVSRLVKWVTIAHEDYTELHFTKDIV
EAGLAGDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNNNDDNIRA
MESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRIKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagagtcaagcaaaaaacgaaagcccaaagtgatccgaagtgatggagctcca
gccgaagggaagcgtactcgttctgacactgagcaggaaggtaaatactacagtgaggag
gctgaggtggacctacgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagctgcagaggctcatggctgagattcaggacctgaagagcaggggcggcaaggatgcg
gcagttgagatagaagatcggaggatccagagctgtgtgcatttcatgactctaaagaag
cttaatcgattagcccacatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtggacgcctatcacctgcagctccagaacctgctgtatgaggtgatgcacctg
cagaaggagatcaccaagtgtctggagtttaagtcaaagcacgaagaaatcgatctggtc
agcttagaggagttctataaggaggctcctccagatatcagcaaggcagaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctgtccaacaaggagaagatcctcaaggagattgag
gtgaagaaggagtacctgagcagcctccagcctcgtctcaacagcaacatgcaggcctcc
ctcccggtgcaggagtacctgttcatgcccttcgaccaggctcacaagcagtacgagaca
gccagacacctgccgcctcccctctatgtgctctttgtccaggccactgcgtacgggcag
gcctgtgataagatgttgtctgtggcgattgaaggcagcgtggatgaggccaaggctctg
ttcaagcctcctgaggactcccaggacgatgagagtgactcggacgccgaggaggagcag
accacgaaacgccggcgacccacactgggagttcagctggacgacaagcgcaaggagatg
ctgaagaggcacccgctgtctgtgctgctggacctgaagtgcaaagatgacagtgtgctg
cacctgactttctactacctcatgaacctcaacatcatgacggtgaaagccagagtgacc
accgccacggagctgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtc
ctgagctgcttgtaccctggggatcatggaaagaagactccaaacccagccaatcagtat
caattcgataaagttggcatcctgactttgagggactacgtacttgacctcggtcacccc
tacttgtgggtgcagaagctgggtggccttcacttccccaaagagcagcctcagcacact
gtgatcacagaccactctctgagcgccagtcacatggagaccaccatgaaactgctgaag
accagggtgcagtcccgcctcgccctccacaagcagtttgcctccctggagcatggcatt
gtcccggtcactagcgactgccactacctcttccctgcaaaggtcgtctctcgcctggtg
aagtgggtgacgattgcccatgaggactacacggagctgcatttcaccaaagacatcgta
gaggcgggactggccggggacaccaatctctactacatggcactcgtggagaggggcaca
gctaagctccaggctgctgtggtgctgaaccctggctactcctccatcccacccattttc
cagctctgtctgaactggaaaggggagaaaaccaacaacaacgatgacaatattcgggcc
atggagagcgaggtcaacgtgtgctacaaggagctgtgcggcccgcggcccggccaccag
cttctgaccaaccagctgcagcgcctgtgcgtgctgctggacgtctacctggagacagag
agccatgacgacagcgtggaggggcccaaggaatttccccaagagaagatgtgtctgcgg
cttttcaggggtcccagcaggataaagccatttaaatataaccaccctcaaggattcttc
agccatcgttga
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