Bos taurus (cow): 533065
Help
Entry
533065 CDS
T01008
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
533065 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bta04040
]
533065 (SCN9A)
Ion channels [BR:
bta04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
533065 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Lustrin_cystein
DUF6739
Motif
Other DBs
NCBI-GeneID:
533065
NCBI-ProteinID:
NP_001104257
BGD-bta:
BT23833
Ensembl:
ENSBTAG00000002425
VGNC:
34355
LinkDB
All DBs
Position
2:29924631..30089670
Genome browser
AA seq
1987 aa
AA seq
DB search
MAMLPPPGPQSFVFFTKQSLALIEQRIAEGKAKEPKEEKKDDDDEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHAAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCVQSSLANNETMENILNTLDEEEYAK
YFYYLEGSKDALLCGFSSDSGQCPEGYTCKKIGRNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEL
EFQQMLDRLKKEQEEAEAIALAAAEYTSIGRSRIMGLSESSSETSKLSSKSAKERRNRRR
KKNQKKLSSGEEKGDDEKLSKSESEESIRRKSFHLGVEGHRRAREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTT
NQIHKKRRHSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLVVGNL
VFTGIFAAEMVLKLIAMDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKKGIKYVKQTLREFVLKAFSKKPKIS
KEIRQTEDLNCKKENYISNRTLAEMSKDHKFHKEKDKTSGFGNSMDKYLMEESDGQSFIH
NPSLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNQSSSSECSTVDNPVPGEGEEA
EAEPVNSDEPEACFTDGCVQRFPCCQVNIESGKGKIWWNIRKTCFRIVEHSWFESFIVLM
ILLSSGALAFEDIYIEKKKNIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWL
DFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSI
MNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTNGLRFPTSEVENRSACLALMNVSQNVR
WKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNKQPIYEYSLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPG
NKFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSDYVTEVLNWINVVFIILFSGE
CVLKLISLRCYYFTVGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRIL
RLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNF
ETFANSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFV
SYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSK
LSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRS
QMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGD
RDDDLPNKEDMVFDNVNENSSPEKTGATPSTVSPPSYDSVTKPDREKYEKDKTEKEDKGK
DGKEGKK
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccgggacctcagagctttgtcttcttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaagcaaaggaacccaaagaagaaaagaaa
gacgatgacgatgaagggccgaagccaagcagtgacttggaagccggcaagcagctgccc
ttcatctatggggacattcctccgggcatggtgtcagagcccctggaggacttggaccct
tactatgcagacaaaaaaactttcatagtgttgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatgctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacatgccgcattcagcatgcttatcatgtgcactattctgacgaactgc
atatttatgaccatgagtaatcctccagactggaccaagaatgtagagtacacttttact
ggaatatatacttttgagtcacttgtaaaaatccttgcaagaggattctgtgtaggagaa
ttcacttttcttcgtgacccatggaactggcttgatttcatagtcattgtctttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtgttgaga
gctttgaaaactatttctgtaatcccaggcctgaagaccatcgtgggggccctgatccag
tctgtgaaaaagctctcagatgtcatgatcctgactgtgttctgtctgagcgtgtttgcc
ctgattgggctgcagctctttatgggcaacctgaagcataaatgcgtgcagagttcgctt
gcaaataatgaaacaatggaaaacatattgaacaccctcgatgaagaagaatatgcaaaa
tatttttattacttggagggatccaaagatgctctcctttgtggtttcagcagtgattca
ggtcagtgtccagaagggtacacctgtaagaagattggcagaaatcctgactatggctac
acgagcttcgatactttcagctgggccttcttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagaccctgcgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcctggctgttgtt
gccatggcctatgaagaacagaaccaggcaaacattgaagaagcgaggcagaaagagtta
gaatttcagcagatgctggatcgacttaaaaaagagcaagaggaagcggaggcaatagca
ttagcagcagctgaatataccagcattgggagaagcagaataatgggtctgtctgagagt
tcttctgaaacatccaaactgagctctaaaagtgctaaagaaagaagaaacaggagaagg
aaaaagaaccaaaagaaactctccagtggggaagaaaagggagatgatgagaaactgtcc
aaatcggaatccgaggagagcatcaggagaaaaagtttccaccttggtgttgaaggtcat
aggcgagcacgtgaaaaaagattgtctacccctaaccagtcaccactgagcatccgtggc
tccttgttttctgcaaggcggagcagcagaacaagtcttttcagcttcaaaggtcgagga
agagatattggatctgagactgaatttgccgacgacgagcacagcatctttggtgacaac
gagagcagaaggggctccctgtttgtgccccacagacctcgggagcggcgcagcagtaac
atcagccaagccagtaggtctcccccagtgctgccagtgaacgggaagatgcacagcgct
gtcgactgcaatggcgtggtctccttggtggatggaccctccgccctcatgctacccaat
ggacagctcctgccagaggtgataatagataaggcaacttctgatgacagcggtacaacc
aatcaaatacacaagaaaagacgtcacagttcttacctcctttctgaggatatgttgaat
gaccccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaacttgaggagtccagacagaaatgtccaccttggtggtacagatttgcacacacattc
ttgatctggaattgctctccatattggataaaattcaaaaaatttatctattttattgta
atggatccttttgtagatcttgctattaccatttgcatagttttaaacacattgttcatg
gctatggaacatcacccaatgactgaggaattcaaaaatgtgctcgttgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatat
gagtatttccaaataggatggaatatttttgatagtcttattgtgaccttaagcttagtg
gaactttttctatcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gttttcaagttagcaaaatcttggccaacactgaacatgctgatcaagatcattggcaat
tcagtgggggctctgggaaacctaaccttggtgttggccatcatcgtcttcatttttgct
gtggttggcatgcagctctttggtaagagctacaaagaatgtgtttgcaagatcaatgaa
gactgcacactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgggtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaa
gccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ctatttcttgctttattactgagctcatttagttcagacaatcttacagccattgaagaa
gacactgatgcaaacaacctccagattgcagtggccagaattaagaagggaataaagtac
gtgaaacaaaccttacgggagtttgttctaaaagcattttccaaaaagccaaagatttcc
aaagagattagacaaacagaagatctaaattgtaaaaaggaaaactacatctctaaccgc
acacttgctgaaatgagcaaggatcacaaattccacaaagaaaaagataaaaccagtggt
tttggaaacagcatggacaaatacttaatggaagaaagtgatggtcagtcatttattcat
aatcccagcctcacagtgacagtaccaattgcacctggggaatctgatttggaaattatg
aacactgaggaacttagcagtgattcagatagcgaatacagcaaagggaggctgaaccaa
tcaagttcctcagagtgcagcacagttgataaccctgtgcctggagaaggagaagaggca
gaggctgagcctgtaaattcagatgagccagaggcctgttttaccgatggttgcgtacag
aggttcccatgctgccaagttaacatagaatcagggaaaggaaaaatctggtggaacatc
aggaaaacgtgcttcaggatagttgagcacagttggtttgaaagcttcattgttctcatg
atcttgctcagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagaac
attaagattatcctggagtatgctgacaagatattcacgtatatcttcattctagaaatg
cttctaaaatgggtagcatatggttacaaaacctatttcaccaatgcctggtgttggctg
gatttcttaattgtcgatgtttctttggttacattagttgcaaacactcttggctactca
gatcttggtcccattaaatcccttcggacacttagagctttaagacctctgcgagcttta
tctagatttgaaggaatgagggtggttgtgaatgcactcatcggtgcaattccttctatc
atgaatgtgctacttgtgtgtctcatattctggctgatatttagcatcatgggagtaaat
ttgtttgctggcaagttttatgagtgtattaacaccacaaatggattacgttttcctaca
agtgaagtggaaaaccgttctgcctgtcttgcgcttatgaatgtcagtcaaaatgtgcga
tggaaaaacctaaaagtgaactttgataatgttggacttggttacctgtctctacttcaa
gtggcaacatttaagggatggatggatattatgtatgcagcagttgattctgttaacgta
aacaagcagcccatttatgaatacagcctctacatgtatatttattttgtcatcttcatc
atctttgggtcattcttcactttgaacttgttcattggtgtcatcatagataatttcaac
caacagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatat
tataatgcaatgaaaaagctgggatccaagaaaccacaaaagccaatacctcggccaggg
aacaaattccaaggatgtatctttgacctagtaacaaaccaagcttttgatatagccatc
atggttctgatctgcctcaacatggtaaccatgatggtggaaaaagagggacaaagtgac
tacgtgactgaagttttaaattggatcaatgtggtttttattatcctgttctctggagaa
tgcgtgctgaaactgatctccctcagatgctactacttcactgtaggctggaacatcttt
gattttgtggttgtaattctctccattgtaggtatgtttctggcagatttgatagaaagg
tattttgtgtcccctaccctattccgagtgatccgtcttgccaggattggccgaatcctg
cgtctgatcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtccctt
cctgcgctgtttaacatcggcctcctgctcttcctggtcatgttcatctatgccatcttt
ggaatgtccaattttgcctatgttaaaaaggaagctggaattaatgacatgttcaacttt
gagaccttcgccaacagcatgatctgcctgttccagattaccacctctgctggctgggat
ggattgctggcacctatcctcaatagtaaaccaccggactgtgaccccaaaaaagttcat
cctggaagctcagttgaaggagactgtgggaacccatctgtcgggatattctattttgtc
agttacatcatcatatcatttctggtcgtggtgaacatgtacattgctgtcatcctggag
aacttcagtgttgctactgaagaaagtactgagcccctgagtgaggacgattttgagatg
ttctatgaggtttgggagaagtttgatccagacgcgacccaatttatagaatatagcaaa
ctctctgattttgcagctgccctggatcctcctcttctcatagcaaaaccgaacaaagtc
cagctcattgccatggacctgcccatggtcagtggggacaggatccactgcctcgacatc
ttatttgcttttacaaagcgtgttttgggggaaggtggagagatggactctcttcgttca
cagatggaagaaaggttcatgtctgcaaatccctctaaggtgtcttatgagcccatcaca
actacactaaaaagaaagcaagaggatgtgtctgctacagtcattcagcgtgcttacaga
cgttaccgcctacggcaaaatgtcaaaaatatatcaagtatatacatcaaagatggtgac
agagatgatgatttgcccaataaagaagatatggtttttgataatgttaatgagaactca
agtccagaaaaaacaggtgcaactccatccactgtctctccaccttcttatgatagtgta
acaaaaccagacagagagaaatatgaaaaagacaaaacagaaaaggaagacaaagggaaa
gatggcaaggaaggcaaaaaatag
DBGET
integrated database retrieval system
