Bos taurus (cow): 533232
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Entry
533232 CDS
T01008
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bta
Bos taurus (cow)
Pathway
bta03082
ATP-dependent chromatin remodeling
bta04714
Thermogenesis
bta05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
533232 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
533232 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
533232 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
533232 (SMARCD1)
03036 Chromosome and associated proteins [BR:
bta03036
]
533232 (SMARCD1)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
533232 (SMARCD1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
533232 (SMARCD1)
PBAF complex
533232 (SMARCD1)
GBAF(ncBAF) complex
533232 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
533232
NCBI-ProteinID:
NP_001033648
BGD-bta:
BT22813
Ensembl:
ENSBTAG00000037935
VGNC:
34993
UniProt:
Q2TBN1
LinkDB
All DBs
Position
5:complement(29799572..29810207)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSLKRPAPQQIKQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQDYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDEEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKVMTDVVGNSEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggtgcggcggctgccctgggcccgggcgggacaccggggcctccggtgcgaatg
gggccggcgccgggtcaagggctataccgctccccgatgcctggagcggcctatccgaga
ccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtccctc
aagagacctgcgcctcagcagatcaagcaggtccagcagcaggcggtccaaaatcggaac
cacaatgcaaaaaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggactatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggaacttcgggtagaaggacggctcctagaggattctgcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttttcttctttttttaaatccttg
gtgatcgaactggacaaagacctgtatggaccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggacggcttccaggtgaaacggccaggagacgtgaatgtg
cggtgcactgtcctgctgatgctggactaccagcctcctcagtttaaattagaccctcgt
ctggctcggctcctgggcatccacacccagacccgtccggtgatcattcaagcactgtgg
caatatattaagacacacaagctccaggacccacatgagcgggagtttgtcatttgtgac
aagtacctccagcagatctttgagtctcagcgtatgaagttctcagagattccccaacgg
ctccatgccttgcttatgccacctgagcccattatcataaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgaggaagtggatgataccttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagagactatcaatcagctgaagacccagcgggagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcgcagtgt
cgggacctcaaggtcatgactgatgtggtgggtaactcagaggaggagcgccgagcagag
ttctacttccagccttgggcccaggaggccgtgtgtcgatatttctactccaaggtgcag
cagagacgacaagaattagagcaagccctggggatccgaaatacatag
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integrated database retrieval system
