Bos taurus (cow): 533406
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Entry
533406 CDS
T01008
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X2
KO
K12200
programmed cell death 6-interacting protein
Organism
bta
Bos taurus (cow)
Pathway
bta03250
Viral life cycle - HIV-1
bta03272
Virion - Hepatitis viruses
bta04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
533406 (PDCD6IP)
03272 Virion - Hepatitis viruses
533406 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
533406 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
533406 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bta04147
]
533406 (PDCD6IP)
Membrane trafficking [BR:
bta04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
533406 (PDCD6IP)
Exosome [BR:
bta04147
]
Exosomal proteins
Proteins found in most exosomes
533406 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
CCDC93_N
DUF792
Ly49
Motif
Other DBs
NCBI-GeneID:
533406
NCBI-ProteinID:
XP_002696972
BGD-bta:
BT23538
Ensembl:
ENSBTAG00000017426
VGNC:
32664
LinkDB
All DBs
Position
22:8019119..8090892
Genome browser
AA seq
875 aa
AA seq
DB search
MAAFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAALGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALNREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKAKRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKE
VFPVLAAKPCIMQAYAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKEF
SDKISRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLFEKMVP
VSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDLSGDTVPQSILTK
STSVIEQGGIQTVDQLFKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKERWQRTP
SNELYKPLRAEGNNFRITLDKAVHADGQVKERYQAHRDTIVLLCKPEPELNAAIPSANPA
KTMQGSEVVNVLKSLLTNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEAIS
VTELDRIYGGLTTKVQESLKKQEDLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLAAAY
DNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAREPSAP
SIPTPTYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRTPASAPAAALAPA
PAPAGSGTTVPAPSQTPGSAPLPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPY
PPVYHQSPGQAPYPGPQQPSYPFPQPPQQSYYPQQ
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttcatctcggtacagctgaaaaagacctcggaggtggacctggccaagccg
ctggtgaagttcatccagcagacgtacccgagcggcggggaggagcaggcccagtactgc
cgcgcggcggaggagctcagcaagctgcggcgcgccgcgctcggccgcccgctggacaag
cacgagggcgcgctcgagacgctgctgagatactatgatcagatctgttccattgaaccc
aaatttccattttctgaaaaccagatctgcttgacatttacctggaaggatgcttttgat
aaaggttcactttttggaggatcggtaaaattggctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccagattgcagcagaacagaacctg
gataatgatgaaggattgaaaatcgctgctaaacattatcagtttgctagtggtgccttt
ttacacattaaagagaccgttttatctgccttgaatagagagcccactgtggacatatct
ccagacactgttgggaccctcagccttatcatgctggcccaggcccaagaagtgtttttt
ttaaaagccaaaagagataaaatgaaagatgccatcatagctaaattggctaatcaggct
gcagattattttggtgatgcttttaaacaatgtcaatacaaagatactctccccaaggag
gtgttccctgtcctggctgcaaagccctgtatcatgcaggcctatgctgagtaccaccag
tctatcctggcaaaacagcagaagaaatttggagaagagattgcacggctacagcatgca
gcagaattgataaaaacagtggcatctcgctatgatgaatacgtcaacgtgaaggaattc
tctgacaaaatcagccgtgcccttactgcggcaaagaaggataatgacttcatctatcat
gatcgagttccagaccttaaagatctggaccctattggcaaagccacacttgtgaaatct
actccagtcaacgtacccatcagccagaaattcactgatctgttcgagaagatggttcct
gtgtcagtccagcagtctttggctgcctataatcagaggaaagctgatttagttaacaga
tcaattgctcagatgagagaagccaccactttggcaaatggggtgttagcttcccttaat
cttccagcagcaattgaagatttatctggagataccgtacctcagtctatattgaccaag
tccacatctgtgattgaacagggaggcatccagaccgttgatcagttgttcaaagagcta
cccgaacttcttcaaagaaatagagaaatcctcgacgagtcattaaggttgttggatgaa
gaagaagcgactgacaatgatttaagggcaaaattcaaggaacgttggcaaaggacgcca
tccaatgaactttataagcctttaagagcagagggaaacaacttcagaatcactttggat
aaagctgtgcacgcagatggacaggtgaaggagcgttaccaggctcaccgagacaccatt
gtgcttctgtgcaagccggagccggagctgaacgccgccatcccttctgctaacccggcg
aagacaatgcagggcagtgaggtggtgaatgtcttaaaatccttattgacaaatcttgat
gaagtaaagaaggaaagagaggggctggagaacgacctgaaatcagtgaattttgacatg
acaagcaagtttctgactgctctggctcaagatggtgtgataaacgaagaagctatttct
gttactgaactggatcgaatctatgggggtctcacaactaaagtccaggaatctctaaag
aaacaggaagatcttcttaaaaatattcaggtctcacaccaggaattttcaaaaatgaaa
caatctaacaacgaagccaatttaagagaagaagtcttgaagaatttagctgctgcgtat
gacaactttgttgaacttgtggctaatttgaaggagggcacaaagttttacaatgagctg
actgaaatacttgtcaggttccagaacaaatgcagtgatatagtgtttgcacggaagaca
gaaagggatgaactcttaaaggacttgcaacaaagcattgccagagaacctagtgctcct
tcaatcccaacacccacataccagtcctctccagctggggggcacgcaccaacgccacca
actccagcaccaagaaccatgccgcctactaagccccagcccccagcccgacctccacct
cctgtgctgccagcaaatcgaactcctgcttcagctccggctgcagctctagctccagcc
ccggctccggcaggctctgggaccactgtaccagctccatcacagactcccggttcagct
cccctgcctcaggcccagggacccccgtaccccacctatccagggtatcccgggtattgc
caaatgcccatgcccatgggctacaatccttatgcgtatggccagtataatatgccgtat
ccaccagtgtatcaccagagccctgggcaggctccatacccgggaccccagcagccttca
taccccttccctcagcccccacagcagtcttactatccacagcagtaa
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