Bos taurus (cow): 533829
Help
Entry
533829 CDS
T01008
Symbol
SOX5
Name
(RefSeq) transcription factor SOX-5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
533829 (SOX5)
Transcription factors [BR:
bta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
533829 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
533829
NCBI-ProteinID:
NP_001076940
BGD-bta:
BT17169
Ensembl:
ENSBTAG00000022360
VGNC:
35149
UniProt:
A4FUB3
LinkDB
All DBs
Position
5:85456641..86631208
Genome browser
AA seq
728 aa
AA seq
DB search
MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHEVDGN
KVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTTLGTPERRKGSLADVVDTLKQRKMEELI
KNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQ
LLAAHDEQKKLAASQIEKQRQQMELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQL
PPLMIPVFPPDQRTLAAAAQQGFLLPPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGP
LQLQQLYAAQLAAMQVSPGGKLPGVPQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPL
NLSAKPKTSDGKSPTSPTSPHMPALRINSGAGPLKASVPASLASPSARVSTIGYLNDHDA
VTKAIQEARQMKEQLRREQQVLDGKVAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEE
GKFSHAMMDFNMSGDSDGSAGVSESRIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKIL
QAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLV
DGKKLRIGEYKAIMRNRRQEMRQYFNVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEH
SSVSSSPEPGMPVIQSTYGVKGEEPHIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSE
NHIAGQAN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgaagttgatggcaat
aaagttatgtcttcatttgccccacacaactcatctacctcacctcagaaggcagaagaa
ggtgggcgacagagtggcgagtccttgtctagtacaaccctgggaactcctgaaaggcgc
aaaggcagcttagctgatgtcgttgacaccttgaaacagaggaaaatggaagagctcatc
aaaaatgagccagaagaaacccccagtattgaaaagctactctcaaaagactggaaagac
aagcttcttgcaatgggatcagggaactttggtgaaataaaagggactcccgaaagccta
gctgagaaggagaggcagctcatgggtatgatcaatcagctaaccagtctgcgagagcag
ctgctggctgcccatgatgagcagaagaaactggctgcgtctcagattgagaaacaacgc
cagcaaatggagctggccaagcagcagcaagaacagatcgcaagacaacagcagcagctt
ctgcagcaacaacacaaaatcaatttgcttcagcagcagatccaggttcaaggtcaactg
ccgccattaatgattcccgtattccctcccgatcaacggacactggctgcagctgcccag
caaggattcctccttcctccaggcttcagctataaggctggatgtagtgacccttaccct
gtacagctgatcccaactaccatggcagctgctgccgcggcaacaccaggcttaggccca
ctccaactgcagcagttatatgctgcccagctagctgcaatgcaggtatctccaggagga
aagctcccaggcgtaccccaaggcaaccttggtgctgccgtatctcctaccagcattcac
acagacaagagcacaaacagcccaccacccaaaagcaaggatgaagtggcacagccactg
aacctatcagctaaacccaagacctctgatggcaaatcacccacatcacccacctctccc
catatgccagctctgagaataaacagtggggcaggccccctcaaagcctctgtcccagca
tcattagctagtccttcagccagagttagcacaataggttatttaaatgaccatgatgct
gtcaccaaggcaatccaagaagctcggcagatgaaggagcagctccggcgggaacagcag
gtgcttgacgggaaggtggctgttgtgaatagtctaggtctcaataactgccggacagaa
aaggaaaaaacaacactggagagtctgactcagcaactggcagtcaaacagaatgaagaa
ggaaaatttagccatgccatgatggatttcaatatgagtggagattctgatggaagtgct
ggagtctcagaatcaagaatttatagagaatccagggggcgtggtagcaatgagccccac
ataaagcgtccaatgaatgccttcatggtgtgggctaaagatgaacgaaggaaaatcctt
caagcctttcctgacatgcacaactccaacatcagcaagatactgggatctcgctggaaa
gctatgacaaacctagagaaacagccatactacgaggagcaagcccgtctcagcaagcag
cacctggagaagtaccctgactacaagtacaagcccaggccgaagcgcacctgcctggtg
gatggcaaaaagctgcgcattggggaatacaaggcaatcatgcgaaaccggcggcaggaa
atgcggcagtacttcaatgttgggcaacaagcacagatccccatcgccacggctggcgtc
gtgtacccgggagccatcgccatggctgggatgccctcccctcacctgccctcagagcac
tccagcgtgtccagcagcccggagcccggcatgcctgttatccagagcacgtatggtgtg
aaaggagaggagccacacatcaaagaggagatccaggctgaggacatcaacggagaaatt
tatgacgagtacgacgaggaagaggatgatccggatgtagattatgggagtgacagtgaa
aaccatattgccggacaagccaactga
DBGET
integrated database retrieval system
