Bos taurus (cow): 534010
Help
Entry
534010 CDS
T01008
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
bta
Bos taurus (cow)
Pathway
bta04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
534010 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
534010 (SOX17)
Transcription factors [BR:
bta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
534010 (SOX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
534010
NCBI-ProteinID:
NP_001193180
BGD-bta:
BT29946
Ensembl:
ENSBTAG00000005748
VGNC:
35144
UniProt:
F1N1F9
LinkDB
All DBs
Position
14
Genome browser
AA seq
410 aa
AA seq
DB search
MSSPDAGYASDEQSQPRSALPAVMAGLGPCPWAESLSPLGDMKMKGEAAASAGAPAGPAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPAAALGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHLGGHYRDCPGLGAPQLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPADCPAPGPYSYAPAADYAGPPEPPGAGPLHPRLGPEPAGPAMPGLLAPPSALHMYYGP
VGSQAAAAGGGGRGFQMPPQPPPHGPGQPSPPPEALHCRDSAEPGAPAELLGEVERTEFE
QYLHFVCKPEMGLPYPGHDAGVTLPDGHGALSSVVSDASSAVYYCNYPDV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgagcagagccagccccggagcgcgctg
cccgccgtgatggccggcctgggcccctgtccctgggccgagtcgctgagtcccctcggg
gacatgaagatgaagggcgaggcggcggcgagcgccggtgcgccggccgggccggcgggc
cgagcgaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggcgaag
gacgagcgcaagcgcctggcgcagcagaacccagatctgcacaacgccgagttgagcaag
atgctgggcaagtcgtggaaggcactgacgctggcagagaagcggccgttcgtggaggag
gccgagcggctgcgcgtccagcacatgcaggaccatcccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctaaagcgggtggagggcggcttcctgcatggcctggcc
gagccgccggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttcccggagcagggcttccccgcgggcccgccgctgctgcccccgcacctgggc
ggccactaccgcgactgcccgggcctgggcgcaccccagctcgacggctaccctctgccc
acgcccgacacgtccccgctggacggcgtggaacccgacccggccttcttcgccgcgccg
ctgccagcggactgtccggcccctgggccttacagctacgccccggccgcggactacgct
gggcccccggagccgcccggcgcggggcccctgcacccgcggctgggcccggagcctgcg
ggccccgcgatgccgggcctcctcgcgccccccagcgccctgcacatgtactacggcccc
gtgggctcacaggcggcggcggcggggggcgggggacgcggcttccagatgccgccgcag
ccgcccccgcacggcccggggcagccgtcgcccccgccagaggcgctgcactgccgggac
agcgcagaaccgggcgccccggccgagctactcggggaggtggagcgcacggagttcgaa
cagtacctgcacttcgtgtgcaagccggagatggggctcccctacccgggacacgacgcc
ggcgtgaccctgcccgacggccacggggccctgtcctcggtggtgtccgacgccagctcc
gcggtgtattactgcaactatcccgacgtgtga
DBGET
integrated database retrieval system
