Bos taurus (cow): 534148
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Entry
534148 CDS
T01008
Symbol
BLM
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
bta
Bos taurus (cow)
Pathway
bta03440
Homologous recombination
bta03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
534148 (BLM)
03460 Fanconi anemia pathway
534148 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bta03032
]
534148 (BLM)
03400 DNA repair and recombination proteins [BR:
bta03400
]
534148 (BLM)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
534148 (BLM)
DNA replication proteins [BR:
bta03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
534148 (BLM)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
534148 (BLM)
Bloom's syndrome complex (BTR)
534148 (BLM)
FA (Fanconi anemia) pathway
534148 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
534148
NCBI-ProteinID:
XP_002696629
BGD-bta:
BT26409
Ensembl:
ENSBTAG00000020301
VGNC:
57310
UniProt:
A0AAA9TDU0
LinkDB
All DBs
Position
21:complement(21840584..21933125)
Genome browser
AA seq
1430 aa
AA seq
DB search
MAAVPQNNLQEQLERHSARKLNNKLSLSKPKSSGFTFKKKVPSANDVSVTSVSVAKTPVL
SDKDVNITEAFSFSEPLPHTTNQQTGINDFKSAPSGPQTKRVGSKPLLPSLSQVPQEVSC
TAQNTPVIKQSLNATFKKLEFSSSSDSLIAFNDWDDMDDFDTSGNSKAFVTPCKNHFVRV
STAQKSKKSKRNLVKAQLNKTHTGETDLAPFSSESKQEHLTEKQKDDSEWLSSDVICIDD
DPDPEELINEDTQENHSLKTHLGAERGNCEKKKNLEETELRSVEKSSCIELDEDDYDIDF
VPPSPEEGMTSTSSSSLKCSSMLKDLDTSDKKHSLSTSEDLSKLKEMATQQPNQETSTSC
EARQTSLQQQLIRVMDRICKLVDAVPDDELKALDCGNELLQQRDIRRKLLAEADFDPSDA
SVLSAMWGCRPDPLESPVKDLASVSLPYAFRKGDSCLAGNAVKEFTLPHLPSNSMSTRER
LLTPPLGKTGVLATTKSPFERPLFSSHLQKSFVSSNWAETPRAEKRNESPDFPGNVLTST
AVKDQNKYTTSINDLERELQAACEIDNFDIDDFDDDDDDWENLMQNLAASKSSTAAYPPI
KEGRPVKSVSERPSSAKTDCLPGASTTQNKNFSESIPNYPDKMEQNLASRNPKHERFQSL
NFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSP
GVTIVISPLRSLIVDQVQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTP
EKVCASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRPDYKRMNILRQKFPSVPVM
ALTATANPRVQKDILTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHP
HDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATI
AFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCILFYTYHDVTRLKRLILM
EKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENEFNPHFCKKYPDVSCDNCY
KTKDFKTKDVTEDVKNIVRFVQEHSSSQGTRNIKHIGPSGRFTMNMLVDIFLGSKSAKIQ
SGIFGKGSTYSRHNAERLFKKLILDRILDEDLYINANDQAIAYVMLGSKAQTVLNGHLKV
DFMETENSSSVKKQKALVAKVSQREEVVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLK
KLAESLSSDPEVLLQIDGVTEDKLEKYGAEVIPILQKYSEWTLPAEDTSPRRSPSSSRGT
RKNTPEESDEGAPISSHYFANKTRNERKRKRMPASQKAKRRRTGFSGSRTKGGSNTCRRI
PSKTKPSNIIGPSSTSHSSQAASGVSRKLGIMAPPKPINRPFLKPSYAFS
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgttcctcaaaataatctacaggaacaactggaacgtcattcggcaagaaag
cttaacaataaattgagtctttcaaaaccgaaatcttcaggtttcacttttaaaaagaaa
gtgccttcagccaacgatgtctctgtaactagtgtgtcagtggcaaaaacacctgtgttg
agtgataaagatgttaatatcactgaggccttttccttcagtgaacctttaccccacacc
accaatcagcagacggggatcaatgactttaaaagtgctccatccggaccgcaaactaag
agagttggttcaaaaccattattgccaagtttgtcgcaggttccccaggaagtttcatgt
acggcccagaacacaccggttataaagcaatccctcaatgctactttcaagaaattagaa
tttagttcctcatcagattctcttattgccttcaatgattgggatgatatggatgacttc
gatacttctggaaattctaaagcatttgtgacaccatgtaaaaaccacttcgtaagagta
agcactgctcagaaatcaaaaaagtctaagaggaacttagtaaaagcgcagcttaataaa
acacatacaggggagactgatttggctcccttctcctctgagagcaagcaggaacatttg
actgagaaacagaaggatgactcagaatggttaagtagtgatgtgatttgcattgatgat
gaccccgatcccgaagagctgataaatgaagatactcaggaaaatcactcgttaaaaact
catttgggagcggaaagaggtaattgtgaaaagaagaaaaacttggaagaaacagaatta
cgttcagtggagaagtcttcatgtattgagcttgacgaagatgattatgacatagatttt
gtcccaccttctccagaagaaggaatgacttctacctcctcatcctctttaaaatgctct
agtatgttgaaggatcttgacacctctgacaaaaagcatagtcttagcacatcagaagac
ttgtcaaaactcaaggaaatggccacacaacagcctaatcaagaaaccagcacaagctgt
gaagctagacagacaagtttacagcagcagcttatccgtgtgatggaccgaatctgtaaa
ttagttgatgctgttcctgatgatgagctgaaagctttggactgtgggaacgagctgctc
cagcagcgggacataagaaggaaactcctagctgaagcggattttgatcccagtgatgcc
agtgttcttagcgccatgtgggggtgtaggcctgatcccctggagagccctgtgaaggac
ttggcctctgtttccttaccttacgcgtttcggaagggtgactcctgtcttgcagggaat
gctgtgaaggagtttactcttccacacctcccctcaaattccatgtccacccgggaacgt
ttactgactcctcccctaggaaagacaggagtcttagccaccacaaagagtccctttgaa
agaccgctattcagttcccatttacagaagtcctttgtaagtagcaactgggctgaaaca
ccgagggcagagaaaagaaatgaaagccctgatttcccaggaaatgttctcacaagcacg
gctgtgaaagatcagaataaatataccacctccataaatgacttggaaagagagctccag
gctgcttgcgagattgacaattttgacatagatgactttgacgatgatgatgatgactgg
gaaaatctgatgcaaaatttagcagccagcaaatcttccacagctgcctacccacccatt
aaggaaggtcgaccagttaaatctgtgtcagaaagaccctcttccgccaagacagactgc
cttccaggggcatctaccactcaaaataaaaacttctcagagtcaattccgaattaccct
gacaagatggagcagaatttagcatccagaaatccgaaacatgagcgtttccagagtctt
aattttcctcatacaaaagaaatgatgaagatttttcataagaaatttggcctgcataat
tttagaactaatcagctagaggcgatcaatgctgcactgcttggtgaagactgtttcatt
ttaatgcccactggaggtggtaaaagcctgtgttaccagcttcctgcctgtgtttctcct
ggggtcactattgtcatttcccctttgagatcacttatagtagatcaagtccaaaagctg
acttccttggatatcccagctacatatctgacaggtgataagacggactcagaagctaca
agtatttacctccagttatcaaaaaaagacccaattataaaacttctgtatgttacgcca
gagaaggtctgtgcgagtaacaggctgatctctactctggagaatctgtatgagaggaag
ctcttggcacgttttgtcattgatgaagcgcactgtgtgagtcagtggggacatgatttt
cgtccagattacaaaagaatgaatattcttcgccagaagttcccttctgttccagtgatg
gctctcactgccacggccaacccccgggtacagaaggacatactcactcagctgaagatt
ctcaggcctcaggtgtttagcatgagcttcaacagacacaatctaaaatactacgtgtta
cccaaaaaacctaaaaaggtggcatttgattgcttagaatggatcagaaagcatcaccca
catgactcagggataatttactgcctctccaggcgagaatgtgacacaatggctgaaacg
ttacagaacgatggccttgctgccctggcttatcacgccggcctcagtgactccgccaga
gacgaagtgcagcacaagtggattaatcaggatggctgccaggtcatctgcgcgacaatc
gcctttggaatgggcatcgacaaaccggacgtgcgctttgtgatccacgcctccctcccg
aagtccgtggagggttactaccaggagtctggccgagccggaagggacggggagatctct
cactgcatactcttctacacctaccacgacgtgacccggctgaagaggcttatcctgatg
gaaaaagatggaaaccgtcatacacgagagacccacttcaataatttgtatagcatggta
cattactgtgaaaatataacagaatgtaggagaatacagcttttggcttactttggcgaa
aatgaatttaatcctcatttttgtaagaaatacccagatgtttcatgtgataactgctat
aaaacaaaggattttaagacaaaagatgtgactgaagatgtgaaaaatattgtaagattt
gttcaagaacacagttcatctcagggaacaagaaatataaagcatataggtccttctggg
aggttcactatgaacatgctggttgacattttcttggggagtaagagtgcaaaaattcag
tcaggaatatttggaaaaggatctacttattcaagacacaacgccgaaagactttttaaa
aaactgatacttgacaggattttggatgaagacttatatatcaatgccaatgatcaagca
attgcctatgtgatgctcggaagtaaagcacaaaccgtactaaatgggcatttaaaggta
gactttatggaaacggaaaattccagcagtgtgaaaaaacaaaaagcgttagtggcaaag
gtgtctcagagggaagaggtggtgaagaaatgtcttggagaacttacagaagtctgcaaa
tctctggggaaagtttttggcgtccactactttaatatttttaataccgtcactctcaag
aagctcgcagaatctttatcttctgatcctgaggttttgcttcaaattgatggtgttacc
gaagacaaactggaaaaatatggtgctgaagtgattccaatattacagaaatactctgag
tggacattgccagctgaggacacctccccacggagaagcccctccagcagcagaggcacc
agaaaaaacactcctgaggagtcggatgagggagcacccatatcttctcactactttgca
aataaaaccagaaacgaaagaaagaggaaaaggatgccagcctcccaaaaagccaagagg
agaagaactggtttcagtggttccaggacgaaaggggggtccaacacatgccgaaggata
ccttctaaaactaaaccctccaacataatcggacccagttccacttctcatagttctcaa
gcagcatcaggagtcagtaggaaactggggattatggctccaccaaagcctataaataga
ccatttctgaagccttcatatgcattttcgtaa
DBGET
integrated database retrieval system
