Bos taurus (cow): 534600
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Entry
534600 CDS
T01008
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03015
mRNA surveillance pathway
bta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
534600 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
534600 (ACIN1)
03015 mRNA surveillance pathway
534600 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
534600 (ACIN1)
03041 Spliceosome [BR:
bta03041
]
534600 (ACIN1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
534600 (ACIN1)
Spliceosome [BR:
bta03041
]
Complex C
Other components
EJC/TREX
534600 (ACIN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
534600
NCBI-ProteinID:
XP_003586557
BGD-bta:
BT16005
Ensembl:
ENSBTAG00000011571
VGNC:
25539
UniProt:
A0ABI0NNR2
LinkDB
All DBs
Position
10
Genome browser
AA seq
1334 aa
AA seq
DB search
MCRRKHPSTSGGTRGALSGNRGVDYGSGRGQLGTFEGRWRKLPKMPEAVGTDPSTSRKMA
ELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKGALMLENLQKHSTPHAA
FQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAESEDEMIHPERVA
SLLPPDFQSSLERPELELSRHSPRKSTSVSEEKGESDDEKPRKGERRSSRVRQARAAKLS
ECSQAAEEEEDQETPSRNLRVRADRNLKTEEEEEEEEEEEEEEEEEDDDDEGQKSRDAPV
LKQFKEEGEEIPIVKVEEVTDERPQTIRSQEQEGLERGGRVTRSQEEARRSHLARHQQEK
EMKTASLEEEREIKSSKGLEEKSKSPSPPQLTEDVAKAPVVLQPELTASEEETPPPLLTK
EASSPPPNTQLQSEEEIEPMEGPAPPVLIQLSPPNADAEARELLLSQHTVQLVGSLSPLS
GPADTKVESPVEKVPEESVLPLVQKSAQAESSAQKGLETESEKSTQPLPLKIEEFTLAKG
ITEESLEQKEGRRASHALLPSHRLKQSADSSSSRSSSSSSSSSRSRSRSPDSSGSQSHSP
PRSKQRDGSGVRAHANPHDRSKVGSRSTSESRSRSRSRSRSASSNSRKSLSPGVSRDSST
SYTETKDPSSGQEVAAPPLPQLQVLEPKERTSTPSSVQVRLVSQPEPAAKHVTQRLQPDR
GSPKKCEAEEAEPPAATQPQTSETPTSHLPESERIHHTVEEKEEVTMDTSENRPENEVPE
PPMPIADQVSNDDRPEGNAEDEEKKESLLPKSFKRKISVVSATKGVPAGNSDTEGGQPSR
KRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEAVVDLHADDSRISEDETERNGD
DGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEAEAPVPPQVSVEVALPPPVEHE
VKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPPRGKISNIVHISNLVRPFTLGQ
LKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATRTALHGVKWPQSNPKFLCADYA
EQDELDYHRGLLVDRPSETKTEEQGMPRPLHPPPPPPAQPPQHPRAEQREQERAVREQWA
EREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRKERAKSKEKKSEKKEKAQEEPP
AKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKEREKEA
ERERTRQLEREKRREHSRERDRERERDRERDRGDRDRERDRERERGRERDRRDTKRHSRS
RSRSTPVRDRGGRR
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagacggaaacacccgagcacttccggaggaacccggggagctctgagtggtaat
cgaggggttgactatggcagtgggcggggccaactcggtacgttcgaagggcgttggcgg
aaattaccgaagatgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcg
gagctggaggaggtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctg
aaggccgcactggagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaag
cggctcaaaggggctctaatgctagaaaatttacaaaaacactcaaccccgcatgctgca
ttccagccaaattcccagattggcgaggaaatgagccagaacagtttcataaagcagtat
ctggaaaagcagcaggagctgcttaggcagcgtttggaacgtgaagctcgagaagctgca
gaacttgaagaagcttcagctgagtcggaggacgagatgatccatcccgagagagtggct
tccctgctgcctcctgactttcagagcagcctggagagaccagagctggagctcagcaga
cattcacccagaaaaagcacctctgtttctgaagagaaaggtgaatctgatgatgagaaa
ccaaggaaaggagaaagacgatcatccagagtcagacaggcaagagcagctaaactctcc
gagtgtagccaggctgcagaggaggaagaggatcaagaaacaccttctagaaatctgagg
gtcagagcagatcgaaatttgaaaacagaggaggaagaagaagaggaggaggaagaggaa
gaagaggaggaagaggaagatgatgatgatgagggacaaaaatctagagatgcaccagtc
ctgaaacagtttaaggaagagggagaagagatacccatagtaaaagtggaggaggtgaca
gatgagagaccccaaactataagatcccaggaacaggaggggttagagagaggagggaga
gttacaaggtcccaggaagaggcccgaagaagtcatctagccagacatcagcaggagaaa
gagatgaaaacagcttctcttgaagaagaaagagaaataaaatcttcaaaaggcttggag
gaaaaatccaagtctccttcccctcctcaattgactgaagatgtggcgaaggccccggtt
gtgctacaaccagaactaactgccagtgaggaggagactcccccacctttacttaccaag
gaagcatcttctccaccacctaatacacagctccagagtgaagaagaaatagagcccatg
gaaggcccggcccctcctgtccttattcagttatctcctcctaatgcagatgctgaggcc
agggagctattactatctcagcatactgtgcagttggtgggaagtttgtctcctttgtca
ggtcctgcagacaccaaagttgaatctccagtagagaaagtgccagaggagagtgtcctg
cctctagttcagaaaagcgcacaagctgaatcctcagcccagaaaggtcttgaaactgaa
tcagaaaaatccactcaaccactccctctaaaaattgaggaattcacgctggccaaaggg
atcactgaggaatctttggaacagaaagaaggcaggagggcttctcatgcccttcttcca
agccacagattgaaacagtcagctgactcctcctctagccgatcctcctcatcttcatcc
tccagttctaggtcaagatctcgctctcctgacagttcaggctctcagtctcactcacct
ccaagatccaagcagagagatggatctggggtacgtgctcatgccaaccctcatgataga
tccaaggtgggctccagatcaacatcagagtccaggtcacgttcccgttctcgttcccgg
tcagcatcaagcaacagcagaaaatctttgagccctggagtctctagggacagcagcacc
agctacactgaaaccaaagatccctcttctggtcaggaggttgcagctccaccattgcca
caactgcaggtccttgagccaaaggagaggacttccaccccatcctctgtccaagtgagg
cttgtgagccaacctgagccagctgcaaagcatgtgacccagaggttacagcctgatcgg
gggagcccaaagaagtgtgaagctgaagaggcagagccaccggctgccacacagccccaa
acctcagagactccgacctctcacctaccagaatcagaaaggattcatcacactgttgag
gagaaggaggaagtgaccatggacacaagtgaaaacagacctgaaaatgaggttccagag
ccccccatgcctattgcagaccaagtcagcaatgatgatcgcccagagggcaatgctgag
gatgaggagaagaaagagagcttgctgcccaaatcattcaagaggaagatctccgttgtc
tcagctaccaagggggtgccggctggaaacagtgacacagaggggggccagcctagtcgg
aagcggcgttggggagccagcacagccaccacccagaagaaaccctccatcagtatcacc
actgaatcactcaagagcctcatccccgacatcaaacccctggcggggcaggaggctgtt
gtggatcttcatgctgacgactcccgaatctctgaggatgagacagagcgtaatggtgat
gatgggacccatgacaaggggctgaaaatatgccggactgtcactcaggtggtacctgcc
gagggccaggagaatgggcagagggaagaggaggaagaagagaaggagcctgaagcagaa
gcccctgtgcctccccaggtctcagtagaggtggccttgcccccccctgtggaacatgaa
gtcaagaaagtgactttaggagataccttaactcgacgttccattagccagcagaagtca
ggagtttccattacgattgatgacccagtccggactgctcaggtgccctccccaccccgg
ggcaagatcagtaacatcgtccacatctccaatttggttcgtcccttcactttaggccaa
ctgaaggagttgttgggacgtacaggaactctggtagaagaggctttttggattgacaag
atcaaatctcactgctttgtaacgtactcaacagtagaggaagcagttgccacccgcaca
gctctccatggggtcaaatggccccagtccaaccccaaattcctttgtgctgactatgct
gagcaagatgagctggactatcaccgaggcctcttggtggaccgtccctctgaaactaag
acagaggagcaggggatgccacggccactgcaccccccgcccccacccccagcccagcca
ccacagcaccccagagcagagcagcgggagcaggagcgggcggtacgggagcagtgggca
gaacgggaacgggaaatggagcggcgggagcggactcgatctgagcgcgaatgggatcgg
gacaaagttcgagaagggccccgatcccgatcccggtcccgtgatcgccgccggaaggaa
cgcgcaaagtctaaagaaaagaagagtgagaagaaagagaaagctcaggaggaaccacct
gccaagctgctggatgaccttttccgcaagaccaaggcagctccctgcatctattggctc
ccactgactgacagccagattgttcagaaggaggcagagcgggctgaacgggccaaggag
cgggagaagcggcgaaaggagcaagaagaagaagagcagaaggagagggagaaggaggca
gagcgggaacggacccggcagctggagcgagagaagcggcgagaacacagccgagagagg
gacagggagagagagagggaccgggagcgggacaggggggatcgagatcgggagcgggac
agggagcgggaacgaggcagggagagggaccgcagagacaccaagcgccacagcaggagc
cggagcaggagcacacctgtgcgggaccggggcgggcgccgctag
DBGET
integrated database retrieval system
