Bos taurus (cow): 534624
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Entry
534624 CDS
T01008
Symbol
CLIP1
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X9
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
bta
Bos taurus (cow)
Pathway
bta04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
534624 (CLIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
534624 (CLIP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bta04812
]
534624 (CLIP1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
534624 (CLIP1)
Cytoskeleton proteins [BR:
bta04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
534624 (CLIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Fungal_TACC
Motif
Other DBs
NCBI-GeneID:
534624
NCBI-ProteinID:
XP_005217947
BGD-bta:
BT17989
Ensembl:
ENSBTAG00000016779
VGNC:
27444
UniProt:
E3W9A2
LinkDB
All DBs
Position
17:52998915..53115694
Genome browser
AA seq
1438 aa
AA seq
DB search
MSMLKPSGLKAPTKILKPGSTALKTPAAVAAPIEKTISSEKASSTLSSETQEEFVDDFRV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCELLKGIFTR
PSKLTRKVQAEDEADGPQTPHASRATSSLSTSGISMASSSPATPSNIPHKSSQPTAKEPS
ATSQISNLTKTASESISNLSEAGSIKKGERELKIGDRVLVGGTKAGVVRFLGETDFAKGE
WCGVELDEPLGKNDGAVAGTRYFQCQPKYGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVM
ATTPASMKRSPSASSLSSMSSVASSVSSKPSRTGLLTETSSRYARKISGTTALQEALKEK
QQHIEQLLAERDLERAEVAKATSHVGEIEQELALARDGHDQHVLELEAKMDQLRTMVEAA
DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEQKSQISEDPENTQTKLEHARIKEL
EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELEKDLALRVQEVAELRRRLESNKPAG
DVDMSLSLLQEISALQEKLEATHSDHQKEVASLKEHFGAREEMHQKELKVLQAATEKLSK
ENESLKSKLDHANKENSDVIALWKSKLETAIASHQQAMEELKVSFSKGVGTETAEFAELK
TQIEKMRLDYQQEIENLQNKQDSERSAHTKELEALRAKLMQVIKEKENSLEAIQSKLDKA
EEQHLVEMEDTLNKLQEAELKVKELEVLQAKCNEQTKVIDHFTSQLKAAEEKLSDLDALQ
KASSEGKLEIENLRQQLEAAEKQIKNLEIEKDAESSKASSITKELQGKELMLNNLQENLS
EVSQVKEALEKELQTLKEKFADASEEAVSFQRSMQETVNKLHQKEEQFNALSSELEKLRE
NLTDMEAKFRERDEREEQLIKAKEKLENDIAAIMKMSGDNSSQLTKMNDELRLKERNVEE
LQLKLTKANENASLLQKSIGEVTLKAEQSQKEAAKKHEEEKKELLRKLSDLEKKMEMSWN
ECQDLKARYEEASSESRAKHEEVLQNLHKLLRDTEERLKAAQEENRELLQKLEELGKQAD
RARAAQTAEDAMQIMEQMTKEKTETLASLEDSKQTNEKLQNELDTLKENNLKNVEELNKS
KELLTVENQKIEEFKKEIETLKQAAAQKSQQLSALQEENVKLNEELGRSRDEVTSHQKLE
EERSVLNNQLLEMKKRESKLIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTALR
GENASAKSLHSVVQSLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQAEEDERAQE
SQIDFLNSVIVDLQRKNQDLKMKVEMMSEAALNGNGDDLNNYDSDDQEKQSKKKPRLFCD
ICDCFDLHDTEDCPTQAQMSEDPPHSTHHGSRSEERPYCDICEMFGHWATNCNDDETF
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgctaaaaccaagcgggcttaaggcccccaccaagattctgaagcctggaagc
acagccttgaagacgcctgctgctgttgctgctccaatagaaaaaacaatatccagtgaa
aaagcatcaagcactctgtcctctgagacacaagaggagtttgtggatgactttcgagtt
ggggagcgagtttgggtgaatgggaataagcctggatttatccagttcctgggagaaaca
cagtttgcaccaggccagtgggccgggatcgttttggatgagcccataggcaagaatgat
ggctcagtagcaggagttcggtacttccagtgtgagcttctaaaggggatatttacccga
ccttcaaagttgacgaggaaggtgcaggcagaggatgaagctgatggcccgcagacgcct
cacgcttccagggcgacttcgtctctgtccacttcgggaatcagcatggcgtcctcgtct
ccagccaccccctcaaatattccccacaaatcatcccaaccaaccgcaaaggaaccttca
gctacatctcagatcagcaaccttacgaaaaccgccagcgaatctatctccaacctttca
gaggccggctcaatcaagaaaggagagagagaactcaaaatcggagaccgagtactggtt
ggtggcacgaaggccggtgtagtccggtttcttggggagacagacttcgccaagggggag
tggtgtggcgtggagttggatgagcctcttgggaagaacgacggggctgttgctggaaca
aggtattttcagtgtcaacccaaatatggcctgtttgctccggtccacaaagtcaccaag
attggcttcccctccaccacgccagccaaagccaaggccgctgcggtgaggcgagtgatg
gcgaccacgcccgccagcatgaagcgcagcccgtccgcctcctctctcagctccatgagc
tccgtggcctcctctgtgagcagcaagcccagccggacaggactgttgaccgaaacctcc
tcccgttacgccaggaagatctccggcaccaccgccctccaggaggccctgaaggagaag
cagcagcacattgagcagctgctggccgaacgggatctagagagggcggaggtggccaag
gccacgagccacgtgggggagatagagcaggagctcgccctggcccgggacggacacgac
cagcacgtcctggaattggaggccaagatggaccagctgcgaacgatggtggaagctgcc
gacagggagaaggtggaacttctcaaccaacttgaagaggagaaaaggaaggttgaggac
cttcagttccgggttgaagaagaatcgattactaagggcgatcttgagcaaaagagccag
atttctgaagatcctgagaatacgcagaccaaactggagcatgcccgcattaaggagctt
gaacagagcctgctctttgaaaagaccaaagctgacaaactccagagggagttagaagac
actagggtggccacggtgtcagaaaagtcccgcatcatggaactcgaaaaagacctcgca
ttgcgagtgcaggaggtagctgagctgcggaggcggctggagtccaataagccagctggg
gatgtggacatgtcactgtccctcttgcaagagatcagcgctttgcaggagaagttagaa
gccacccatagtgaccaccagaaagaagtcgcttctctgaaggagcattttggagcccgg
gaagaaatgcatcagaaggagttaaaggttttgcaggccgccacagagaagctttccaaa
gagaatgagtccctgaaaagcaagctcgaccacgccaacaaggagaattcagacgtgatc
gccctgtggaagtctaagctggagacagccatcgcgtcccaccagcaggccatggaggag
ctgaaggtgtccttcagcaagggggtcggcaccgagacagccgaattcgccgagttaaaa
acgcagatagagaaaatgagactggactaccagcaggaaatagaaaatctgcagaacaag
caagactcagaaaggtctgctcacacgaaagagctcgaagccctaagggctaagctgatg
caggtcattaaagagaaggagaacagtctggaagccatccagtcgaagttggacaaagcg
gaagagcagcacctagtggaaatggaggacaccttaaacaaactgcaggaagccgagcta
aaggtaaaggagctagaggtgctacaagccaaatgcaatgagcaaaccaaggttattgat
cattttacatcacagctcaaggctgccgaagaaaagctctcagaccttgatgcgcttcag
aaagccagctccgaaggtaaattggaaatcgagaacctcagacagcagcttgaggcagct
gagaaacagattaaaaacttagagattgaaaaggatgctgaaagcagcaaggctagtagc
atcaccaaagagctgcagggaaaagagctaatgcttaataaccttcaggaaaacttgagt
gaagtcagtcaagtgaaagaggctttggaaaaagaactgcagactttgaaagaaaagttt
gctgatgcttcagaggaggcagtctcttttcagagaagtatgcaagaaactgtaaataaa
ttacatcaaaaagaggaacagtttaacgcactgtcttccgaactggagaagttgagagaa
aatttaacagatatggaggcaaaatttagagagagagatgaaagggaagagcagctgata
aaggcaaaagaaaaactggaaaatgacattgcagcaataatgaaaatgtctggagacaat
tcttctcagctgacaaaaatgaatgacgaactacgtctgaaagaaagaaatgtagaagaa
ttacagctgaaactaaccaaggctaatgaaaacgcaagccttctgcagaaaagtattggg
gaagtaactctcaaagctgaacagagtcagaaagaagcagctaaaaagcatgaggaagaa
aagaaagaactgctgagaaaactgtcagacctggaaaagaagatggaaatgagctggaac
gagtgtcaagatctgaaagccaggtacgaggaagccagttccgagagcagagccaagcac
gaagaagtcctgcagaacctccacaagctgctacgggacacagaggagcggctgaaggca
gcacaggaggagaaccgcgagctgctgcagaagctggaggagctggggaagcaagccgac
agagccagagctgctcaaaccgctgaagatgccatgcagataatggaacagatgaccaaa
gagaagactgaaacactggcctccttggaagattccaagcaaacaaatgaaaaactgcag
aatgaattggatacacttaaagaaaacaacttgaaaaacgtggaagagctgaacaaatca
aaagagcttctgacggtagagaaccaaaaaatagaagaattcaagaaagaaatagaaacc
ctaaagcaggcagcagctcagaagtcccagcagctctcagcgctgcaagaagagaacgtg
aaacttaacgaggagctggggaggagcagggacgaagtcaccagtcaccaaaagctggaa
gaagagagatcggtgctcaataatcagttgttagaaatgaaaaagagagaatccaagtta
ataaaagacgcagatgaagaaaaagcttccttgcagaaatccatcagtatcactagtgcc
ttactcacagaaaaggatgccgagctggaaaaactgagaaatgaggtcacggcgctcagg
ggagagaacgcgtccgccaagtccttgcattcagttgttcagtctctagagtctgataag
gtgaagcttgagctcaaggtaaagaacttggagcttcaactcaaagaaaacaagaggcag
ctcagcagctcctcaggtaatactgatactcaggcagaagaggatgaaagagcccaggag
agtcagattgacttcctcaattcagtaatagtggaccttcagaggaagaatcaggacctc
aagatgaaggtggagatgatgtcagaagcagccctgaatgggaacggggacgacctgaac
aactacgacagtgatgaccaggagaaacaatccaagaagaaaccccgcctcttctgtgac
atatgtgactgcttcgatctccacgacacagaggattgtcccacccaggcccagatgtcc
gaggacccgccccactccacacaccacggcagtcggagcgaggaacgcccctactgtgac
atctgtgagatgtttgggcactgggctaccaactgcaatgacgacgagaccttctga
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integrated database retrieval system
