Bos taurus (cow): 535018
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Entry
535018 CDS
T01008
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bta03016
]
535018 (TARBP1)
03036 Chromosome and associated proteins [BR:
bta03036
]
535018 (TARBP1)
Enzymes [BR:
bta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
535018 (TARBP1)
Transfer RNA biogenesis [BR:
bta03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
535018 (TARBP1)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
535018 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
535018
NCBI-ProteinID:
XP_024842683
BGD-bta:
BT28512
Ensembl:
ENSBTAG00000004517
LinkDB
All DBs
Position
28:complement(7200681..7269343)
Genome browser
AA seq
1612 aa
AA seq
DB search
MEWVLADALLSQSRDPRVLLGALCRGEASAERVETLCFLLQRLEDEEARGGGGGAGALPE
AAREVAAGYLVPLLRGLRGCPAGGADDPGPAARQRRRVLRAAGAALRSCARLAGGPQLAA
ALAEEALCDLLNAGPAPGLEGAAEAAVEVLVAVGSCLRPREDAPLLERVARAALALALGG
DKAGPSPDAAALVAGRLLPALGRCGGAALRAVWGGLVAPGVSEGPGRVGSQLLILSALAE
KLLPEPGADSVPASREAGLDARRCWRFWSTVQAGLAWSEDALTRKRARYLLQRAVEVSAE
LGTDCACAPGEGTGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNGL
FEYAVSEENGCWLFHPSWHLCIYKRMFESENKILTKEGVTHFLELYETRILPFSPEISEF
IIGPLMDALSESSLYSRSPGQLIGSVSPLGLKLQKFLVTYISFLPEEIKSSFLLKFIQKM
TSRHWCAVPILFLSKALANVPRCKALGMEGLLALRDVLQCTMITHQILLRGAAQCYLLQT
AMNLVDVEKVSLSDISTFLMSVRQEESLGRGTSLWMELCDWLRINESYFKQSSSCSSTGL
HETSSLNAYVRNLVQEYIRSSAWEGGENSCMPDWFEAKLVALMVLLAIDVERMKSQYSEK
RRTQNVLRIFLDPLLDALVKFGTNAYMPLLKTDRCLQLLLKLLHTCLLKGSGTQDDEVFT
LLQNFIMSTTESISEFILRRLTMNELSTVSDLDRCHLYLMVLTELINLHLNVGWKRGNPI
WKVISPLKNASIRHLQEMDRGQEPTLGRQIQRAVSMAALAMVCEVSQKPELQLDSLDVGP
PETFISSLQLNQTLQKPHTEEESSFFEESSSSQGWGKIAAQYIHDQWVCLSFLLRKCHTL
IPASEGEILEPTLPAVPMAVRTLQSALEALTVLPSEQVLPVFHCMKILVPKLLTTSESLC
IESFDMAWKIIASLSNTQLIFWSNFKAFVQFVFDPKVLTIAAKIKGQAYFKIKEVMYRII
EMSAIKTGVFNILISYCCRSWVVSASNVSLSIAKNYSELVLEACIFGTVFRRDQRLIQDV
QTFIENLGHECAANVVIENTKREDHYVRICAVKFLCLLDGSNMSHKLFMEDLAIKLLDKD
ELVSKSRTRYYVNSQQHRVKNRIWQILLVLFPKFDQNFLNKIIDKIFQAGFINNQASIKY
FIEWIIILILHKFPQFLPKFWNCFSYGEENLKTSICTFLSVLSHLDVITETILEKKLILK
QALTIVLQWCFNHNFSIRLYALVALKKIWSMCKGLHIEELAALTSVIESSLSQVENMHGA
GSAKKNWQRIQEHFFFTAFHPLKDYCLETIFYTLPRLSGLTEDEWIAIGKFTRFTDIPLG
AGFQWYLSTTHLCELKPGDWSQQDAGSNSGEADNQSEWTDVQKKIIPWKNHVPDFDLELV
FQDRAAKLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGAAALVMGSLQCVRDKQFQHLS
VSAEQWLPLVEVKPPQLIDYLQQKKAEGYTIVGVEQTAKSLDLTRYCFPEKSLLLLGNER
EGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLKQGVSTA
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtgctggcggatgcgctgctctcgcagagccgggacccccgggtcctgctt
ggggcgctgtgccgcggggaggcatctgcggagcgcgtggagaccctgtgttttcttctg
cagcgactggaggatgaggaagcgcgcggcggcggcggcggcgcgggcgcgctcccggag
gcggcgcgcgaggtcgccgccgggtatctggtgccgctgctgcggggcctgcgcgggtgc
ccagcgggcggcgcggatgaccccggtcccgcggcccgccagcgccggcgcgtcctgagg
gcggcaggcgctgccctgcgctcgtgcgcccgcctggccgggggcccgcagctggcggcc
gcgctggccgaggaggcgctatgtgacctgctcaacgcggggcccgcgcccggcctcgaa
ggggccgccgaggcggccgtggaggtgctggtggccgtggggtcctgcctgcggcctcgc
gaggacgcgcccctgctggagcgagtggcgcgggccgctctcgcgctggcgctgggtggg
gacaaggcggggccgtccccggacgctgcggcgctggttgccgggcggctgctgccggct
ctgggccggtgcggcggggcggcgctgcgggctgtgtggggcgggctggttgcgcccggg
gtgtctgaggggccgggccgcgtcgggtcgcagctgctgattctgagcgccctcgccgag
aagctactgccagagcccggcgcagacagcgtgcctgcctcgcgcgaggcgggcctggac
gcccggcgctgctggcgcttctggagcacggtgcaggccgggctggcctggtctgaggac
gccctgacgcgcaagcgggcgcgctacctgctgcagcgggctgtggaggtgtcggcggaa
ctggggaccgactgcgcgtgcgcccccggcgaaggaaccggcccaagtctgttttggtgg
tctgagaagaaaaaagatgagcttctaaagttttgggaaaactatattttaattatggaa
actctcgaaggaaatcagatacatgttataaagccagttttaccaaagctaaacggtcta
tttgaatatgcagtgtcggaggaaaatggatgctggctctttcacccatcctggcatctg
tgcatttataaaagaatgtttgaaagtgaaaataaaatcctgactaaagaaggcgttacc
cattttttggaactgtatgaaacaaggattcttccattttcaccagaaatttctgagttt
atcattggaccattaatggatgcactttcagagagctctctatacagcaggtccccaggc
cagctgataggaagtgtttctccattgggactgaaattacagaagtttttagtcacttat
atttcttttcttccagaagaaataaagagtagtttcctgttaaaatttattcagaagatg
acgagcagacattggtgtgctgttcccattttgtttctatccaaggctttggcaaatgtc
ccaagatgtaaagccttgggtatggaaggacttcttgccctcagggatgttctgcagtgc
accatgatcacacatcagatcctgctgagaggggcagcgcagtgctatctcctccagacc
gccatgaatctggtagacgtggagaaagtgtcactctctgacatctcaacttttctcatg
tcagtgagacaagaggagtcattaggacgaggaacttcactgtggatggagctttgtgat
tggttgcgtattaacgaaagctatttcaagcaatcctcaagttgtagctccactggactt
cacgagacttcttctttaaatgcttatgtcaggaacctagtgcaagagtatattaggtca
tctgcctgggaaggaggagaaaacagctgtatgcctgattggtttgaagccaagcttgtt
gctctgatggtgttgctggccatagatgtagaaagaatgaagagtcaatatagtgaaaag
cggaggacacagaatgtattaaggatattcttagatcctctcctggatgcccttgtgaag
tttggtacaaatgcctacatgcccttgctgaaaactgaccgatgcctgcagttgctgttg
aagttactgcacacttgcttgttgaaaggttccggtacccaagatgatgaagtatttact
cttcttcagaactttatcatgtctactacagagagcatttctgaatttattctcagacga
cttactatgaatgaactaagtactgtttcagatctggatcgctgccatttgtacctgatg
gtgttaactgagcttataaatctccacttgaatgttgggtggaaaagaggcaaccctatt
tggaaagttatttctcctttgaaaaatgcatccattcggcatcttcaggagatggaccgt
ggacaggagcccacactgggtagacagattcagagagccgttagcatggctgccttggcc
atggtgtgtgaggtcagccagaagccagagctacagctggactctctggatgtgggtccc
ccagaaacgttcatctcatcactgcagctcaatcaaactctgcagaagccccacacagag
gaggagagcagtttttttgaagagtcatcatcttcccaaggatgggggaaaatagctgca
caatatattcatgatcagtgggtctgcctctctttcttgttgagaaaatgtcacaccctt
ataccagcctcagagggtgaaattctggaacccactctacctgctgttccaatggcagta
aggactttgcagtctgcactggaagccctcacagttcttccttctgagcaggtcttacct
gtgttccattgtatgaaaattttggttcccaagcttctgaccacctctgaatcactctgc
atagaatcttttgacatggcatggaaaatcatagcctctttaagcaacactcagctgata
ttctggtctaattttaaagcttttgttcagtttgtttttgatcccaaagttcttaccatc
gctgcgaaaatcaagggccaggcatatttcaaaataaaagaggttatgtacaggataatt
gaaatgtctgctataaaaactggagtcttcaatatactgataagttattgctgcagatct
tgggtagtttctgcttcaaatgtgtctttatcaattgctaaaaattacagtgaacttgtc
cttgaggcatgtatatttggaaccgtgtttcggcgtgatcaaagacttattcaggatgta
cagacgttcatagaaaatcttggacatgagtgcgcagcaaatgttgttattgaaaatacc
aaaagagaagaccattatgtgagaatttgtgctgtcaaattcctgtgtttattagatggc
tcaaatatgtctcataagttgtttatggaagatcttgcaatcaagctattggataaagat
gaactggtgtccaaatcaagaactcgatactatgtcaactctcaacaacacagagtgaaa
aaccgaatttggcagattctgcttgtacttttccccaaatttgatcagaatttcttgaat
aagattattgacaagattttccaggctggcttcatcaataatcaggcatccataaaatat
tttatagaatggattattatactgattcttcataaattccctcaatttcttccgaagttc
tggaactgcttttcttatggtgaagaaaaccttaaaacaagcatttgtacatttttatca
gttttgtcacacttggacgtcattactgaaaccatcctggaaaagaaactaattctgaag
caagcccttactatcgtgctgcagtggtgcttcaatcacaattttagcattcgactatat
gcgttagtcgctcttaagaaaatctggagcatgtgtaaggggttacacattgaagaactt
gcagctttaacttctgttattgaatccagtctgagtcaagtggaaaacatgcacggagca
gggagcgcgaagaagaactggcaacgcatccaggagcatttctttttcacagcattccac
ccgctgaaggattactgtctggagacgatattttacacccttccacgcctctccggcctt
actgaggatgaatggattgccattggtaaatttaccaggttcactgacattcctctaggt
gcagggtttcagtggtacctttctacaactcatctgtgtgaactaaagccaggtgactgg
tcccagcaggacgcaggttccaactcaggtgaagcagataaccagtcagagtggactgat
gttcagaagaagattatcccgtggaagaaccatgttccagactttgacctggagctggta
tttcaggatcgtgctgccaaacttggaaagtcaatcagcagactgattgtagtggcctca
ctcattgataagccaaccaatttaggagggctgtgccggacctgtgaggtgttcggggcc
gcggcgctggtcatgggcagccttcagtgtgtcagagacaagcagtttcagcacctcagt
gtttcagcagaacagtggcttcctttagtggaggtaaaaccacctcagctgatcgattat
ctacaacagaaaaaggcagaaggttacaccatcgtgggtgtggaacagactgccaaaagt
ttagacctaacccggtactgcttccctgagaagtctttactcttgttgggcaacgaacgt
gaagggattccagcgaatctgatccagcagctggacgtgtgcgtggagattcctcagcag
ggcatcatccgctccctcaacgtccatgtgagtggggcgctgctgatctgggagtacacc
aggcagcagctgctgaagcagggggtctccacggcctga
DBGET
integrated database retrieval system
