Bos taurus (cow): 535248
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Entry
535248 CDS
T01008
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
535248 (VPS50)
Membrane trafficking [BR:
bta04131
]
Protein recycling
Others
EARP complex
535248 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
535248
NCBI-ProteinID:
NP_001098883
BGD-bta:
BT17689
Ensembl:
ENSBTAG00000014255
VGNC:
36826
UniProt:
A7Z023
LinkDB
All DBs
Position
4:10600841..10732875
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESFSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDVNHYTKVQQAYRLLGKTQTAMDQLHMHLTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMMGAEETSFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSSATSSKTVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADSAATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccggcagggtctgaaaagtcctccagagagcttc
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactggagaagctccctcctgtt
ctcaatttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tcaaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgaa
agagttacctcattacaaacaggtcttcagttagctgctgtaatctgcaccaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattggacttctgaaatctctgagaacgataaaaacattg
caaagaacagatgtccgcctaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaattgaggaacagttggatgttgct
ctgtccaaaatatgcaagaattttgacgttaaccactacaccaaagttcagcaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttaacccaagcc
attcataacaccgtgtttcaagttgttcttggctatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatatcccatgccttgctgacctgtgcaaagccctgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgataatgaggatactacttctgcttctgaaggg
agtaatatgatgggtgctgaagagacaagttttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaattattttaagaactaccatagaacaaggcttgatgaactg
agaatgtttctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcggtttcacccagt
aagcagtcatctgcaacttcctcaaaaacggtaaccttgtttgagcagtactgcagtggt
gggaatccatttgaaattcaggcggaccacaaagatgaagaaacagaagatgtcctggct
tctaatgggtatgaatctgatgaacaggaaaaaagtgcctatcaggaatatgacagtgac
agtgatgttcctgaggaactgaaacgagatttcgttgatgagcagacaggcgatgctcct
gtgaaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgctttcgatgttatccatttcatgtct
cagctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaacaggactaggtcttagtagtagtagactaagaacaactctaaacaggatacaa
gaaagcctcattgatctggaggtttcggctgattcggctgccacgctcacagcagcagaa
gagaggaaggagaaggtgccgagccctcatctgagtcacctagtggttttgacctctggg
gacacactgtatgggttggcggaaagagtggtcgccacagaatccttggtattcttggct
gaacagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaaaccc
tttcttcagcagttttattctcagacggtctcaacggccagtgaactacgcaaaccaatt
tactggattgtagctggtaaagccattgattatgaacagatgctgctgctgatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacgctgtta
aaggaatttgagcagtttaacatgcggttgaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatatactttgggaacattgtatacgcctcgctaatagaactattgtg
gaaggatacgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaactgatatcagacccattccggataaa
gaatttgtggaaacctatattaaagcgtactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggagtattcaacaaagcagctgaccaacctggtaaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctctcagcgatagatgatatagac
agacccaaaagataa
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