Bos taurus (cow): 536093
Help
Entry
536093 CDS
T01008
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
bta
Bos taurus (cow)
Pathway
bta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
536093 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bta03041
]
536093 (DHX8)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
536093 (DHX8)
Spliceosome [BR:
bta03041
]
Complex C
Other components
Step II factors
536093 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
Sigma54_activ_2
OB_RRP5_4th
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
536093
NCBI-ProteinID:
NP_001193020
BGD-bta:
BT23630
Ensembl:
ENSBTAG00000008339
VGNC:
28059
UniProt:
F1MEM4
LinkDB
All DBs
Position
19:43415313..43443775
Genome browser
AA seq
1220 aa
AA seq
DB search
MAVAVAMAGAVPGTELGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKHRDTEHRDKAKKKKRSRSR
ERERDRDRERERERDRDHKWRHRSRSRSRSRTRDRNKGKSRYRSRSRSQSPPRDRKDRDK
YGDRNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
HAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
LYNRYEEPNAWRISRAFRRR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggccgtggctgtggccatggcgggagccgtacccgggacagagctaggccccgcagaa
gaactcgccaaactcgagtatctgtctttggtgtcaaaggtttgcaccgagctggataat
cacttaggtatcaacgacaaggatttggctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatactttcaaggcttcgctggtcaaaaatggtgcagaattcacggattca
ctcattagtaacttgctgcgtctcatacaaaccatgcggcctccagcaaagccttctacc
agcaaagatccagttgttaagcccaaaactgaaaaagaaaagctgaaggaactcttccca
gtcctttgccagccagacaacccttctgttcggaccatgctggacgaggatgacgtgaaa
gtcgctgtggatgtcctgaaagaactggaggccttgatgcccagtgcagcaggccaggag
aagcacagagacaccgagcaccgggacaaggccaagaaaaagaagcgcagccggagccga
gagcgagagcgagaccgtgaccgcgagcgagaacgagaacgtgatagagaccataagtgg
agacaccggtcccgctctcgatcgcgttcccggacccgggacaggaataaggggaagtct
agataccggtccaggagcagaagtcagagtccccccagagatcggaaagaccgagacaag
tatggggatcggaatctggacagatggagagataagcacgtggaccgccctcccccagaa
gagcccgccatcggggacatttacaacggcaaggtcaccagcattatgcagtttggatgt
tttgtgcagctggagggactgaggaagcggtgggaaggcctggtgcacatctctgagctc
cggcgggaaggccgtgtggccaatgtggctgacgtggtgagcaaaggccagagggtcaag
gtcaaagtgctgtccttcactgggaccaaaaccagcttgagcatgaaggatgtggatcaa
gagactggagaagatctaaacccaaatcgacggcggaatcttgtcggggagaccaacgag
gagacctctatgaggaatccggacaggcccacccacctgtccctcgtcagtgcccctgaa
gtagaggatgactcactagagcgcaagcgccttactcgaatctctgacccagagaagtgg
gagataaagcagatgattgctgccaatgtcctttccaaggaagagttcccagacttcgat
gaagagactggcattctccctaaagtggatgatgaagaagatgaggaccttgagattgag
ctggttgaggaagagcctccattcctgagagggcacaccaaacaaagcatggacatgagc
cctatcaaaatcgttaagaatccagatggctccctctcccaagcagcaatgatgcagagt
gccttggccaaagaaaggcgggaacttaagcaagcacagcgggaagctgagatggattct
attcccatgggactcaacaaacattgggttgatcctctgcctgatgcggaaggcagacag
attgctgccaacatgaggggtattgggatgatgcccaatgacattcccgagtggaagaag
catgcctttgggggcaacaaagcttcatatggaaaaaagacccagatgtcaatcattgaa
caaagggagagcctccccatctacaagctgaaggagcagctggtccaggctgtccatgac
aaccagatcctgattgttattggagagactgggtctgggaagaccacgcagatcacccag
tacctggcggaggcgggctacacttccaggggcaagattggatgtacccagcctagaaga
gtagcggccatgtctgtggccaaaagagtgtcagaggagttcggttgttgcttaggccaa
gaggtgggctacaccattcgatttgaggactgcaccagccccgaaacagtcatcaagtac
atgacagatgggatgttgctccgagaatgcctgatcgaccccgacctcactcagtatgca
atcatcatgttggacgaggcgcacgagagaacaattcacactgatgtgctctttggattg
ctgaaaaagacggttcagaaacggcaggacatgaaactgattgtcacctcagccacgttg
gatgctgtgaagttttctcagtacttctatgaagctcccatctttaccatcccaggtcga
acatacccagtggaaatattgtacacaaaggaacctgaaaccgattatctagatgctagc
ttgatcacggtcatgcagatccacttaacagaaccaccaggtgatatcctggtcttcctg
actggtcaggaagagatcgatactgcttgcgagatcctgtatgaaagaatgaaatccctg
ggacctgatgttccagagctgattatcctcccagtgtactctgctctccccagtgagatg
cagacccgaatctttgacccagctccacctggcagcagaaaggtcgtgattgccaccaac
attgcggagacatcgctgactattgatggcatttactatgtggtggaccctggattcgtg
aagcagaaggtgtacaattctaagacagggattgaccagctcgtggtgactcctatttct
caggctcaggcaaagcaacgagctggcagagctgggagaacaggcccagggaagtgttat
aggctgtacacagaacgtgcctaccgagatgaaatgctgaccaccaacgtgccagaaatt
cagagaaccaacttagcaagcacagtgctctcgctcaaggccatgggcatcaatgacctg
ctgtcctttgacttcatggatgccccaccaatggaaaccttgatcacagccatggagcaa
ctgtacacgctgggggccctggacgacgagggcctgcttactcgcctgggccgcaggatg
gcagagttccctctggagccaatgctgtgcaaaatgctgatcatgtctgtgcatctgggc
tgcagtgaggaaatgctgaccattgtgtccatgctgtctgtgcagaacgtcttctacagg
cccaaagataaacaagcccttgcagatcagaagaaggccaaattccaccagaccgaaggg
gaccacctcaccctgctggctgtgtacaactcctggaagaacaacaagttctccaaccca
tggtgctatgagaactttatccaggctcgttctctgcgccgggcccaggacattcgcaag
cagatgctgggcataatggacaggcacaagctggatgtggtgtcctgtggtaagtccaca
gtccgagtgcagaaggccatctgcagtggattcttccggaacgctgctaaaaaagaccca
caggagggttaccggacactgatcgaccagcaagtggtctacatccatccgtccagtgct
ctcttcaacagacagcccgaatgggtggtgtatcatgagctggtgctgaccacgaaggag
tacatgcgtgaggtcaccaccatcgacccccggtggcttgtggagtttgcgccggccttc
ttcaaggtgtctgacccgaccaagctaagcaagcagaagaagcagcaacggctggaaccc
ttgtacaaccgctatgaggagcccaatgcctggagaatatcccgagccttccggcggcgc
tga
DBGET
integrated database retrieval system
