Bos taurus (cow): 537453
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Entry
537453 CDS
T01008
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
bta
Bos taurus (cow)
Pathway
bta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
537453 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
537453 (PATL1)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
537453 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
537453 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
537453
NCBI-ProteinID:
NP_001180136
BGD-bta:
BT24367
Ensembl:
ENSBTAG00000005913
VGNC:
32593
UniProt:
F1N1E7
LinkDB
All DBs
Position
15
Genome browser
AA seq
771 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PAAVNEQSGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRIGQMLPPAPGFRAFFSAPPPTTPPPPQQHPPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHIRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEMQGDGPKKERTKLITPQVAKLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVAR
ILPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPPVTVTSLLQQL
MNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLVVLSRGEDLQSSDAASELAQSNPWTEVMF
VATRELLRIPQTGLAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaggacgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaactggaagagaagcta
cctgcagcagttaatgaacaaagtggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagagaggctcagcaagatggtgattgaaaatgaacttgaa
gacccagctatcatgagggcggtacagaccaggcccgtgttgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccccag
ggcccagaagacgatcgggacctttccgagcgcgcattaccaaggcggtccacctcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtgcccagcttcaaccagcagattctgtgtccaaagcctgtccacgttcggcccccaatg
ccgccacggtatcctgctccctatggtgagaggatgtctccaaaccagctctgcagtgtc
ccgaactcctccctgctgggccacccttttccccctagcgtccctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggattcgtgggcagcccacttgccgccatgaatcccaagctg
ttgcaagggcgaattggacagatgctccccccggcgccaggcttccgcgccttcttcagc
gccccaccccccactacaccaccccctccgcagcagcacccccctggcccaggaccccac
ctgcaaaacctaagatcacaggctccaatgtttagaccagacacaacccaccttcatcca
cagcaccgtcgacttttgcatcagagacagcaacagaatagaaatcaacatcggaatctc
aacggtgcaggagacagagggagtcaccggagcagtcatcaggatcatatccgaaaggat
ccgtatgccaacctcatgctgcagcgagaaaaagactgggtctctaaaatccagatgatg
caactgcaaagcactgatccctacctggatgatttttattatcagaattactttgaaaaa
ctggagaaactgtcagctgctgaagaaatgcaaggtgacggcccaaaaaaggagcgcacc
aagctcatcacgcctcaggtggccaagctggagcacacctacaagccagtgcagtttgag
ggctctttgggaaagctcactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacgtctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttttcataattgagaaaacctatagtttactgcttgatgtggaggattac
gaaaggcgttatctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgttgcatgtatgacaacttaagggggaaattgcctggacaggagaggccg
agtgatgaccactttgtacagatcatgtgtatccgaaaggggaagagaatggtagcccgg
attctgcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctccctttcctcatcaagaaggacgcacaggatgaggtgctgccatgcctattgagtccc
ttctctctcctcctctaccatcttccaccagtgaccgtcaccagccttctgcagcagctg
atgaacctacctcagagtgcagcggccccagctccgtccaacccgcacctctctgccgtg
ctccagaacaagtttggcctgtccctgctcctcgtcgtcctgagccgcggggaagaccta
cagagctcagacgctgcttcagaattggcgcaaagcaacccatggacggaggtgatgttt
gtggcaacccgagaacttttgcggattccccagacgggcctggccaagccaatctctata
cccacaaacctagtatccctcttttctcgttacgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacggtaa
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