KEGG   Bos taurus (cow): 537706
Entry
537706            CDS       T01008                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
bta  Bos taurus (cow)
Pathway
bta03013  Nucleocytoplasmic transport
bta03015  mRNA surveillance pathway
bta03040  Spliceosome
bta05014  Amyotrophic lateral sclerosis
bta05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    537706 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    537706 (ALYREF)
   03015 mRNA surveillance pathway
    537706 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    537706 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    537706 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    537706 (ALYREF)
   03041 Spliceosome [BR:bta03041]
    537706 (ALYREF)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     537706 (ALYREF)
    TREX complex
     537706 (ALYREF)
Spliceosome [BR:bta03041]
 Complex C
  Other components
   EJC/TREX
    537706 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    537706 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication F07F6_N
Other DBs
NCBI-GeneID: 537706
NCBI-ProteinID: NP_001030494
BGD-bta: BT15200
Ensembl: ENSBTAG00000008498
VGNC: 25855
UniProt: Q3T0I4
LinkDB
Position
19
AA seq 257 aa
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq 774 nt   +upstreamnt  +downstreamnt
atggccgacaaaatggatatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcccagggtggccgcggcggc
ggggcccaggccgccgcgcgagtgaaccgaggcggcggacccattcggaatcggccggcc
atagcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcccgacaaatggcagcatgaccttttcgatagcggttttgggggtggtgcc
ggcgtggagaccggtgggaaactgctggtgtcaaatctggattttggagtgtccgacgct
gatattcaggagctctttgctgaatttggaactctgaagaaggcggctgtgcactacgac
cgatctggccgcagtttaggaacagctgacgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggcgtccctttggatggccgccccatgaacattcagctc
gtcacctcacagattgacacgcagcggagacctgcacagagtgtaaacagaggtgggatg
actagaaaccgtggttcaggaggttttggtggtggcggcggcacccggagaggcacccgt
ggaggcagccggggcagaggcagaggcaccggcaggagttcaaagcagcagctttccgca
gaagagttagatgcccagctggatgcttataatgcaagaatggacaccagttaa

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