Bos taurus (cow): 538232
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Entry
538232 CDS
T01008
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
538232 (SOX30)
Transcription factors [BR:
bta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
538232 (SOX30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
538232
NCBI-ProteinID:
NP_001039894
BGD-bta:
BT22879
Ensembl:
ENSBTAG00000020491
VGNC:
35148
UniProt:
Q29RR8
LinkDB
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Position
7:complement(69217376..69297698)
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AA seq
766 aa
AA seq
DB search
MERARPEQPPQQRQLPRATPPRPLRPAPPPLPVEGASFRAAATEPSPSPPTPCAAAIATV
ASSCGEPSASGVQPAARRLLQVKPEQVLLLPPGPPLPQAREESAATSPAQARLLQLRPEL
LLLPPPPPASEGIPCRPELHPLQPRALHVKAEKQEPGPGLDLLAGPRRAVEACPKTSRTV
KAEGSGPLNSRRGEEKKGKLEAEEIVSYAAKGEEGKSLAVLREGVIKTEAPERLREDCRL
STEPASNGLAHGNKDVILTQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIRL
TKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMV
WARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVY
QPRPGKRKRFPLSVSSVFSGTTQNIISTNPTIYPYRSPTYSVVIPSLQNAITHPVGESPP
TIQLPTPAVQRPSPITLFQPSVSSTAQVAVQAPSLPLRPALPPQRFAGPSQADTHQLHSG
VSRSVKRPTPVSLESTNRIPTSASPAHSRFATSTIQPPKEYPSVSTCPRSTPISQAPPIP
HSHIYQPSPLGHPAALFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPE
CLGYYEDRYQKHEAMFSALNRDYPFRDYPDERAHNEDSRSCENMDGTSYYNSHCHSGEEY
LNPIPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagagagcccggccggagcagccgcctcagcagcgccaactgccgcgggcgaccccg
ccgcgcccgctacgccctgctccgcccccgctgcccgtcgagggcgcctccttccgggca
gcggccactgagccctctccgtcgccgcccaccccgtgcgcggccgccattgcgaccgtc
gcctcgtcgtgtggggaaccctctgcgtcgggcgtacagccagcggcacgacggctgctg
caggtgaaaccggagcaggtgttattgctgccacccgggccaccactgcctcaggcccgg
gaggaaagcgccgccacctctcccgcgcaggcgcggctgctgcagctgaggcccgagctg
ctcctgctgccgccgccgccccccgcatctgagggcatcccctgcaggcctgagttgcac
ccgttgcagccccgagcgctgcacgttaaggcggagaagcaggagccgggacccggcttg
gatctgttggctgggcctcggagggccgtcgaggcgtgccctaaaacctccaggacggtg
aaggcagaaggctctgggcccctcaacagccgccgaggggaggagaagaagggcaagttg
gaggcggaggagatcgtaagctacgcagcaaaaggcgaagaaggcaaaagcctggcagtc
ctcagagaaggagtcatcaaaacggaggcgcctgagagacttcgagaggactgcaggctc
agtacagagcccgcgtccaatggcctggcccatggcaacaaggatgtcatcctgacccag
ccgtccagtgcctttgggccacatcagcaagacctcaggatccctttaactcttcacacc
gtaccccctggggcccggatccagtttcagggacctccaccttcagagctgatacgattg
accaaggtcccgttgacaccagtgcctattaaaatgcagtccttactggagccttctgta
aaaattgaaaccaaagatgtcccgctcacggtgcttccctcagatgcaggaataccagat
actcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtt
tgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgcagaa
atcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctat
tatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtttat
caacctcgtccagggaagcgaaaacgcttccctctaagcgtttctagtgtattttctggt
accacacagaatatcatctctacaaatccaacaatttatccttatcgctcacctacctac
tctgtggtaattcccagcctacagaacgccatcactcatccagttggtgaatctccacca
accatccagctgcccacacctgcagtccagcgtccaagccccatcacacttttccagccc
agcgtctccagtactgcccaggtggctgtccaggctccaagtctgcccctccgtccagca
ctcccaccccagcgctttgctgggccctcccaagcggacactcatcagctgcattctgga
gtcagtcgctctgtgaagagacccactcctgtttctctggagagcaccaacaggattccg
actagtgcaagtcctgcccattccagatttgcaacctcaaccatccaacctcccaaggag
tatcccagcgtttccacttgtccgagaagtactccaatttcccaggctcctcctattcca
cactcacacatctaccagccctctccccttggccatccagctgcattgtttgggacacca
ccaagattctcttttcatcacccttacttcctacctggacctcactacttcccatcaagc
acgtgcccttatagtcggccgccctttggctatggaaattttccaagttcaatgccagaa
tgccttggttattatgaagacaggtaccaaaaacatgaggctatgttttcagctttaaat
agagactatccttttagagactacccagatgaacgtgctcacaatgaagattctcgaagt
tgtgagaacatggatgggacttcttactataacagtcattgccacagtggggaagaatac
ttaaatcccatccctcagctggacattggagccttggagaatgtcttcacagccccgaca
tcaactccctctagtatccagcaagtcaatgtcactgacagtgatgaggaggaagaagaa
aaagtgctcaggaatttataa
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