Bos taurus (cow): 538384
Help
Entry
538384 CDS
T01008
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
538384 (PRDM1)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
538384 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
zf-met
Motif
Other DBs
NCBI-GeneID:
538384
NCBI-ProteinID:
NP_001179865
BGD-bta:
BT26353
Ensembl:
ENSBTAG00000000816
VGNC:
33288
UniProt:
A0A3Q1NM21
LinkDB
All DBs
Position
9:complement(43843910..43866380)
Genome browser
AA seq
828 aa
AA seq
DB search
MLDICLEKRVGTTLAAPKCSSSAVKVPGLAEGTEGTMKMDMEDADMTLWTEAEFEEKCTY
IVNDHPWDSGVEGGTSVQAEASLPRNLLFKYATNSKEITGVVSKEYIPKGTRFGPLIGEI
YTSDAVPKNANRKYFWRIYSRGELHHFIDGFNEEKSNWLRYVNPAHTAREQNLAACQNGM
NIYFYTIKPIPANQELLVWYCRDFAERLHYPYSGELTMMNLTQTQSRPKQQSTEKHELCP
KSVPKREYSVKEILKLDSHPSKGKDLYRSNISPLTSEKDAEDFRKNGSPEMPFYPRVVYP
IRAPLPEDFLKAPLGCYGMERPPYITHSPISSSTTPSPSARSSPDRSLQSCSPHSSPGNT
VSPRAPGPQEARDSYAYLNAPYGAAAEGLGSLAGYGPPTHLPPAFIPSYNAHYPKFLLPP
YGMNCNGLGAAVSNINGLNSFGLFPRLYPVYSSLLGGGGLPPPVLASASLPSSLPSEGAR
RLLQPEHPREVLVPAPHSAFSLPGAAASLKDKACTPTSGSPTAGTAATAEHVVQPKATSA
AAAAPGGEEAVNLIKNKRNMTGYKTLPYPLKKQNGKIKYECNVCAKTFGQLSNLKVHLRV
HSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGE
KPYQCKVCPAKFTQFVHLKLHKRLHTRERPHKCAHCHKSYIHFCSLKVHLKGHCPVAPAT
GLPLEDLARINEEIEKFDISDNADRLEDMEDNIDMTSVVENEILAVVRKEKEETGLKASL
QRNLGNGLLSGYNLYESTEPSLLKLPHSNPLPLGPVKVKEETVEPMDP
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatttgcttggaaaaacgtgtgggtacgaccttggctgcccccaagtgtagc
tccagtgctgtgaaggttccagggttggcagaggggactgaagggaccatgaaaatggac
atggaggacgcggatatgactctgtggacagaggctgagtttgaggagaagtgtacatac
attgtgaatgaccacccctgggattctggtgtggaaggaggcacttcggttcaggcggag
gcttccttaccgaggaatctgcttttcaaatatgccacaaacagcaaagagattactgga
gtggtgagtaaagaatacataccaaagggaacacgttttggacctctaataggtgaaatc
tacaccagtgatgcagttcccaagaacgccaacaggaaatatttttggcggatctattcc
agaggggagcttcaccacttcattgatggctttaatgaggagaagagcaactggctacgc
tacgtgaacccagcgcacactgcccgggagcagaacctggccgcctgtcagaacggcatg
aacatctacttctacaccattaagcccatccctgccaaccaggagcttcttgtgtggtac
tgccgggactttgcagaaaggcttcactacccttattccggagagctgacaatgatgaat
ctcacacaaacccagagccgtccaaagcagcagagcactgagaaacatgaactgtgccca
aagagtgtcccgaagagagagtatagcgtcaaagagatcctaaaattggactcccaccct
tccaaagggaaggacttgtaccgctccaacatttcacccctcacttcagagaaggacgcg
gaagacttcaggaaaaacgggagcccggagatgcccttctacccgcgcgtggtgtacccg
attcgcgccccgctcccggaagactttctgaaagcacccctgggatgctacgggatggag
cggccgccctacatcactcactcccccatatcgtcctccacgacgcccagcccctcggcg
cgcagcagcccggaccggagcctgcagagctgcagcccgcacagcagccccgggaacacg
gtgtcgccgcgggcccccggcccccaggaggcccgcgactcctacgcctacttgaacgcc
ccctacggggccgccgccgaggggctgggctccctagccggctacgggccgcccacccac
ctgccgcccgccttcatcccctcctacaacgcgcactacccgaagttcctgctgccccct
tacggcatgaactgcaacggcctgggcgccgccgtgagcaacatcaacggccttaacagc
ttcggcctcttcccgaggctgtacccggtgtacagcagcctcttgggcgggggcggcctg
cctcccccggtgctggcgtccgcctcgctccccagctcgctgccctcggagggggcgcgc
cgcctgctgcagcccgagcacccccgggaggtgctggtgcccgcgccgcacagtgccttc
tccctccccggggcggccgccagcctgaaggacaaggcctgcacccccaccagcggctcc
ccgacagccgggaccgccgccacggccgagcacgtggtgcagcccaaagctacctcagcg
gccgctgcggcccccggaggcgaggaggcggtgaatctcatcaagaacaaaaggaacatg
actggctacaagacactcccctacccgctgaagaagcagaacggcaagatcaagtatgag
tgcaacgtctgcgccaagactttcgggcagctctcaaacctgaaggtccacctcagagtg
cacagtggagaacgacctttcaaatgccagacgtgcaacaagggcttcactcagctcgcc
catctgcagaaacactacctggtacacacgggagagaagccacatgaatgccaggtttgc
cacaagcgatttagcagcaccagcaatctcaagacccacctgcgactccactccggagag
aaaccttaccagtgcaaggtgtgccccgccaagttcacgcagtttgtgcacctgaaactc
cacaagcgcctacacacgcgggagcggccccacaagtgcgcccactgccacaagagctac
atccatttctgcagcctcaaggtccacctgaaggggcactgtcctgtggccccggccact
gggctgcctctggaggacctggccagaatcaacgaagagattgagaagtttgacatcagc
gacaatgccgaccggctggaggacatggaggacaacatcgacatgacctctgtggtggaa
aacgagattctggccgtggtcagaaaagagaaggaagaaactggcctgaaagcgtctttg
caaagaaacctgggaaatggactgctctcagggtataacctctatgagtcaacagagccg
tccctcctgaagttgcctcacagcaacccactacctctgggacctgtaaaggtcaaagaa
gaaacagtcgaacctatggatccttaa
DBGET
integrated database retrieval system
