Bos taurus (cow): 538406
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Entry
538406 CDS
T01008
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bta02000
]
538406 (TMC1)
03037 Cilium and associated proteins [BR:
bta03037
]
538406 (TMC1)
Transporters [BR:
bta02000
]
Other transporters
Pores ion channels [TC:
1
]
538406 (TMC1)
Cilium and associated proteins [BR:
bta03037
]
Other cilia and associated proteins
Stereociliary proteins
538406 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
CDC45
Ac76
DUF2589
Motif
Other DBs
NCBI-GeneID:
538406
NCBI-ProteinID:
XP_024851786
VGNC:
35917
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All DBs
Position
8:48890505..49006479
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AA seq
794 aa
AA seq
DB search
MIRHFIFVLDSSGGFVWEGLLSLVLQHYFEFQEMQISIDMQIQVEEKEDDTEESSSEEEE
EENKLPRRQSLRPKRKRTRDVINEDDPEPEPEDEETRKAREKERRRRLKRGAEEEEEIDA
EELERLKAELDEKRQMIATVKCKPWKMEKKIEVLKEAKKFVSENEGALGKGKGKQWFAFK
MMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYGVNMVLFILT
FSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVLYDFNGLAQYSVLFYGYYDNKRTI
GWMNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDDGGGDDNTFNFSWKVFTSWDYLIG
NPETADNKFNSITMNFKEAIIEERAAQVEENIHLIRFLRFLANFFVFLTLGGSGYLIFWA
VKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRI
FALLLGNLYVFILALMDEINNKIEEEKLVKANITLWEANMIKAYNASLAGNTTGPPFFVH
PADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYP
SYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARV
FKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGETLEHDFP
SWMAKILRQLSNPGLVIAVVLVMALTIYYLNATAKGQKAANLDLKKKMKQQALENKMRNK
KMAAARAAAAAGGQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtcatttcatatttgtacttgacagttcagggggttttgtttgggaggggctt
cttagcttggttcttcagcattactttgagtttcaggagatgcagatcagcattgacatg
caaatccaagtggaggagaaagaagatgatactgaggaaagttcaagcgaagaggaagag
gaggaaaacaaactacctcgaagacagagcttgagaccaaagaggaaacggaccagagat
gttatcaatgaagatgatccagaacctgaaccagaggatgaagaaacaaggaaggccaga
gagaaagagagaaggaggaggttaaagagaggagcggaagaagaagaagaaatagatgca
gaggaattggaaagattgaaggcagagttagatgagaaaagacaaatgatcgctactgtc
aaatgcaagccttggaaaatggagaagaaaattgaagttctcaaggaagcaaaaaaattt
gtgagtgaaaatgaaggggctcttgggaaaggaaaagggaaacagtggtttgcatttaag
atgatgatggccaagaaatgggcaaaatttctccgagattttgagaacttcaaagctgct
tgtgtcccgtgggaaaataaaatcaaggcaattgaaagtcagtttggttcatcagtggct
tcatacttcctctttttgagatggatgtatggagtaaacatggttctctttatcctgaca
ttcagccttatcatgttgccagagtacctctggggtttgccatatggcagtttacctagg
aaaacggttcccagggctgaggaggcatcagcagccaactttggtgtcctgtatgacttc
aatggcttggctcaatattccgtcctcttttatggctattacgacaataaacgaacaatt
ggatggatgaatttcagactgccactctcctattttctcgtggggatcatgtgcattgga
tacagttttctggttgtccttaaagcgatgaccaaaaatattggtgatgatggaggtggt
gatgataacactttcaactttagctggaaggtgttcactagctgggactaccttattggc
aaccctgaaacagcagacaacaaattcaattctatcacaatgaactttaaggaagctata
atagaagaaagagcagcccaagtagaagaaaacatccacttgatcagattcctgaggttt
cttgctaacttcttcgtgtttctaacacttggcgggagtggatacctcatcttttgggct
gtgaagcgatcccaggaatttgcgcagcaagatcctgacacccttgggtggtgggaaaaa
aatgaaatgaacatggtcatgtccctcctgggcatgttctgtccaacactatttgactta
tttgctgaattggaagactaccatccgctcattgctctgaaatggctactgggacgcatt
tttgctcttcttttaggcaacctgtatgtatttattcttgccctgatggatgagattaac
aacaagattgaagaggagaagctagtaaaggccaatattaccctatgggaagccaacatg
atcaaggcctacaatgcttcccttgctggaaataccactgggccacccttttttgtgcac
cctgcagatgtacctcgaggaccctgctgggaaacaatggtggggcaggaatttgtgcga
ctgactgtttctgatgttctgaccacctatgtcacaattctcattggggactttctccga
gcatgttttgtgaggttttgcaactactgttggtgctgggatttggaatacggataccct
tcatacactgagtttgacatcagcggcaatgtccttgctctgatcttcaatcaaggaatg
atctggatgggctccttcttcgctcccagcctcccaggcatcaatatccttcggctccat
acatccatgtacttccagtgctgggctgtgatgtgctgcaatgttcctgaggccagggtc
ttcaaggcttccagatcgaataacttctacctgggaatgctcttgctcatcctcttcctg
tccaccatgcccgtcctgtacatgatcgtgtccctcccaccatcttttgattgtggcccc
ttcagtggcaaaaataggatgtttgaagtcattggagaaacgctggagcatgatttccca
agctggatggcaaagatcttgagacagctttctaatcctggactggttattgctgttgtt
ctggtcatggctttgaccatctattatctcaatgctactgcaaagggccagaaggcagca
aatttggatctaaaaaagaagatgaaacagcaagctttggagaacaaaatgcgaaacaag
aaaatggcagctgcacgagcagctgcagctgctggtggccagtaa
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