KEGG   Bos taurus (cow): 538662
Entry
538662            CDS       T01008                                 
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
bta  Bos taurus (cow)
Pathway
bta03018  RNA degradation
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    538662 (LSM2)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    538662 (LSM2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    538662 (LSM2)
   03041 Spliceosome [BR:bta03041]
    538662 (LSM2)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     538662 (LSM2)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     538662 (LSM2)
Spliceosome [BR:bta03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    538662 (LSM2)
 Complex C
  U2 snRNP components
    538662 (LSM2)
SSDB
Motif
Pfam: LSM SM-ATX DYW_deaminase
Other DBs
NCBI-GeneID: 538662
NCBI-ProteinID: NP_001094647
BGD-bta: BT22508
Ensembl: ENSBTAG00000005634
VGNC: 31054
UniProt: A6QQV3
LinkDB
Position
23:27528402..27533360
AA seq 95 aa
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atgctcttctattcctttttcaagtcccttgtcggcaaggatgtggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccattctgtggatcagtatctcaacatcaaacta
actgacatcagtgtcacagaccctgagaaataccctcacatgttatcagtgaagaactgc
ttcatccgtggctcagtggttcggtatgtgcagttgccagcagatgaagtcgacacacag
ttgctacaagatgcagcaaggaaggaggccttgcagcagaagcaatga

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