Bos taurus (cow): 538674
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Entry
538674 CDS
T01008
Name
(RefSeq) protocadherin-11 X-linked isoform X5
KO
K16498
protocadherin delta 1
Organism
bta
Bos taurus (cow)
Pathway
bta03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
538674
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bta01009
]
538674
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bta04515
]
538674
Protein phosphatases and associated proteins [BR:
bta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
538674
Cell adhesion molecules [BR:
bta04515
]
Cadherins
Protocadherins
538674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF6377
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
538674
NCBI-ProteinID:
XP_015317028
Ensembl:
ENSBTAG00000001911
UniProt:
A0AAA9S3D3
LinkDB
All DBs
Position
X:39843014..40644983
Genome browser
AA seq
1022 aa
AA seq
DB search
MDLLSGTYIFAVLLACVVFQSGAQEKNYTIREEMPENVLIGDLLKDLNLSLIPDKSLTTP
MQFKLVYKTGDVPLIRIEEGTGEIFTTGARIDREKLCAGIIVDTHCFYEVEVAVLPDEIF
RLVKIRFLIEDINDNAPLFPATVINISIPENSAINSRYALPAAIDPDTGINGVQNYQLIK
GQNIFGLDIIETPEGEKMPQLIVQKELDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVA
DTNDNHPVFKEDEIEVSIPENAPVGSSVTQLHATDADIGENARIHFYFSSLVSSVAKRLF
HLNSTTGLITVKEPLDREESPNHKLLVLASDGGLMPARAMVLVNVTDVNDNVPLIDIRYI
INPINGTVVLSENAPLNTKIALITVTDKDADHNGRVTCFTDHEVPFRLRPVFSNQFLLET
AAYLDYESTREYAIKLLASDAGKPPLNQSSMLLIKLKDENDNAPVFTQPFISLSVPENNS
PGTQLTKISATDADTGRNAEIHYLLGIDAPSEFNLDHRTGILTAVKKLDREKQEKYSFTV
LAKDNGMPSLITNATVLVTILDQNDNSPVFTHNEYNFYVPENLPRHGTVGLITVTDPDYG
ENSAVTLSILDANDDFTIDPQSGVIQPNISFDREKQESYTFNVKAEDGGRVSHSSTAKVT
INVVDVNDNKPVFVVPPSNYSFELVSPSANPGTVVFTVVAIDNDTGMNAELRYSILGGNT
KGLFMIDQTTGNITLKEKCVLADLGLHKLIVKAKDLGQPDSLFSVINVNLFVNESMTNAT
LIYELVRKNIEIPVTQNVETTHTSSPSSDYVKIMVAIVAGTITVILVIFITAVVRCRQSP
HLKAAQKNKQNSEWVTPNPENRQMMMMKKKKKHTPKNLLLNFVTIEEAKADDADNDRNTV
TLDLPVELEEQTMVKYNWGTTPTTFKPDSPDLAQHYKSASPQPAFQIQPETPLNLKHHII
QELPLDNTFVGCDSISKCSSSSSDPYSISECSYPVTNIKTPVSVHTRLTDSRTSTIEIYS
EI
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggacttgttgtccgggacgtatatatttgcggttctgttagcatgtgtcgtgtttcag
tctggcgcccaggagaagaactacaccattcgggaagaaatgccagaaaacgtcctcata
ggcgacttgctcaaagacctcaacttgtcgctaattccagacaagtctttaacaactcct
atgcaattcaagttggtatacaagaccggagatgtgccactgattcgaattgaagagggc
acaggtgagatcttcactactggagctcgcattgatcgtgagaaattgtgtgctggcatc
atagtggacacccattgcttttatgaagtggaggttgccgttctgccggatgaaatattt
agattggttaaaatacgttttctgatagaagacataaacgataatgcaccattattccct
gcaacggttatcaatatatcaattccagagaactcggctataaactctcgatatgctctc
ccagcggccattgatccagacacaggaataaacggagttcaaaactaccaactaattaag
ggtcaaaatatttttgggcttgatatcattgaaaccccagaaggagaaaagatgccacaa
ctaatagttcaaaaggagttagatagggaagagaaagatacatatgtaatgaaagtaaag
gttgaagatggtggctttcctcaaagatccagtactgctattttgcaagtcagtgttgct
gatacaaatgacaaccatccagtttttaaggaggatgagattgaagtcagtataccagaa
aatgctcctgtaggttcttcagtaacacagctccatgccacagatgctgatataggtgaa
aatgccaggattcatttctatttcagcagtcttgtctccagcgtggccaagaggttattt
cacctcaactctaccactggacttatcacagtaaaagaaccactggatagggaggaatct
ccaaaccacaagttactggttttggcaagtgatggtggattgatgccagcaagagcaatg
gtgctagtaaatgttactgatgtcaatgataatgtcccattgattgacataagatacatc
attaatccaatcaatggcactgtggttctttcagaaaatgctcctctcaacaccaaaatt
gctctcataactgtgacagataaggatgctgaccataacggtagggtgacatgctttaca
gatcatgaagtccctttcagattaaggccagtgttcagtaatcaattcctcctagagact
gctgcatatcttgactatgagtccacaagagaatatgcaattaaattactggcctcagat
gctggcaaacctcctttgaatcaatcatccatgctcctcatcaaattaaaagatgaaaac
gacaatgctccagttttcactcagcctttcataagtctttctgttcctgagaataactct
cctggtacccagttgacaaaaataagtgcaacagatgcagacactgggcgtaatgctgag
atacattacctgctaggcattgatgctccatctgaattcaacctggatcatcgtacaggc
attctgactgcagtgaagaaattggatagagaaaaacaggaaaaatactcattcacagtt
ctggcaaaagataatgggatgccatctttaataaccaatgccacagtcttagtgaccatt
cttgatcagaatgacaatagtccagttttcactcacaatgagtacaacttctatgtccca
gaaaaccttccaagacatggcacagtaggactaattactgtaactgatcctgattatgga
gaaaattctgcagtaactctctccattttagatgcaaatgatgacttcacaattgatcca
cagagtggtgtcatccaaccaaatatttcatttgatagagaaaaacaagaatcttacact
ttcaatgtaaaggctgaggatggtggtagggtatcacattcttcaactgccaaagtcact
ataaatgtggtcgatgtcaatgacaataaaccagtttttgttgtccctccttccaactac
tcttttgaattggtttcaccatctgctaatccaggcacagtggtcttcacggtagttgct
attgacaatgacactggcatgaatgcagagcttcgttacagcattttaggaggaaacaca
aaaggtctgtttatgattgaccaaacaacaggcaacattacactgaaggagaaatgtgtc
cttgcagatcttggtttacacaaactgatagtcaaagccaaggatttagggcaacctgat
tctctcttcagtgtcataaatgttaatctatttgttaatgagtcgatgaccaatgctaca
ctaatttatgaattggtgcgcaaaaacattgaaataccagtgacccaaaatgttgagaca
actcatacatcctcaccatcaagtgactatgtcaaaatcatggttgccattgttgctggc
accataactgtcattcttgttattttcatcactgctgtagtaagatgccgccaatcacca
caccttaaggctgctcagaaaaacaagcagaattctgaatgggttactccaaaccctgaa
aacaggcagatgatgatgatgaagaaaaagaagaagcatacccctaagaacttactgctt
aactttgtcactattgaagaagctaaggcagacgatgctgacaatgatagaaacaccgtc
acactagaccttcccgttgaactggaagagcaaactatggtcaagtacaactggggcact
acacctactactttcaagcctgacagccctgatttggcccaacactacaaatctgcctct
ccacagcctgctttccagatccagccagaaactcccctaaatttaaagcaccacatcatc
caggaactgcctcttgataacacctttgtgggctgtgattccatctccaagtgttcctcc
agcagttctgatccctacagcatttctgagtgcagctatccagtgacaaatatcaagacc
cctgtgtctgtacacaccagactgactgattccaggacatcaactattgaaatctacagt
gagatataa
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