Bos taurus (cow): 539275
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Entry
539275 CDS
T01008
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
539275 (CHD9)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
539275 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
539275
NCBI-ProteinID:
NP_001192579
Ensembl:
ENSBTAG00000002287
VGNC:
27284
LinkDB
All DBs
Position
18:21555470..21782071
Genome browser
AA seq
2883 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLPDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVAD
GSPMWGHQTATSISNQNGSPFHQPGHSHSMHQTKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKTFMDVNVSGPHRVSVNHPPQMNNASTSQQSLSMQQFSQTSNPS
VHFLKCSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNSLLQPSAVLAPNHT
NQTLSDFTGSNSFSPHRGIKQESTQHMLNPNTSLNSNNFQMLHSSHPQGNYNSKLSPVHM
NFPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPQFD
ESAFGQDNSSHVLDHDLDRQFTSHLVTRPSDMVQTQLHNQARSWHSSLSNHQHLHDRNRL
CLQRQPPSSKKSDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAKE
RGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKTKTCSKLKEKTKIGKLII
TLGKKQKRKNESSDEISDAEQMTQHAFKEEDSQKRRSNRQIKRKKYAEDAEGKQSEEEVK
GSMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRTIKKEISSGVMIDTEEFFVK
YKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVL
EVSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRHLDR
PPPNIWKKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL
YEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQ
GRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE
HKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMME
LRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR
ASLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDI
DQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISG
RNSLVIDTPRIRKQTRPFSATKDELAELSEPESEGDEKPKLRRPCERSNGYGRTECFRVE
KNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITP
TEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKH
IKHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDA
DKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKP
APAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNR
QIQQIQPTFPVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDP
DRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPSIFIQPITEE
RASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGSHDRDLLIGAAKHGV
SRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDPKA
VILEDVKVKSENLKEEPQSSEEESMSSEETRTLIKSEPVSPKNGVLPQATGDQKSGGKGE
TDRRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSH
SRSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEEVQKREGTPHMKAYDEE
SVASLSTTQDETQDSFQMNNGTAESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLKG
KWPSARRSYDANAVASFYTTKLLDSSGAATEYSEPSAPPPAGAAVKEEHDQSTQMSKEGG
LKLTFQKQGLTQRRPLDSEDCAPGQQQYLTRLRDLQGASESSLASFPKSLPLSGTPIQST
LGANGVLLDNQPVVKKRRGRRKNVEGVDILFFNRNKPPNHVTLGLTTSQISTGINPALSY
TQPQGIPDTETPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVEDLGAFIPRMQLHE
GRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKENAEYG
VAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKATAAAAAATASSIS
GNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAGLSSGGEAKNVAAMFPML
LSGMTGLPNLLGMGGLLTKPTESGTEEKKGNDSKEVEGKKERTESQNPENGGENSVSSSP
ASSTAALSTAAAASPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQSNTFDVQKNKNSDL
GSSKSVEVKEEDSRVRDQEDKGGTEPSPLHENSTDEGSEKADASSGSDSTSSSSEDSDSS
NED
NT seq
8652 nt
NT seq
+upstream
nt +downstream
nt
atgacagatcccatgatggacttttttgatgatgccaatctgtttggtgagaccttagaa
ggtttgccagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcacatagactcactgaatcatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcagtttgattcaatgaaatttcac
caagttaatcagtcttttggtagcccagctgaacatgtgttatcgccacactctcagttt
aattgttctccaatccacccccagaaccagcccaacggtttgtttccagatgtagcagat
ggcagtcctatgtggggccatcagacagctactagcatttcaaatcaaaatgggtctcct
tttcaccaaccaggacattctcactctatgcatcaaactaaaagctttgtggcacaccat
gactttgccttatttcaggccaatgaacaacaaacacagtgcacttcgctacgctcacaa
caaaacagaaataatcttaacccagggcaaaattctcttagtcagtctaaaacttttatg
gatgttaatgtttctggtccacacagagtcagtgttaaccatccaccacaaatgaataat
gcatctacttcacaacagtccctttcgatgcagcaattttcccaaacatcaaacccttca
gtacacttcctcaagtgtagcagtcaccaagaaggtaattttaatggaccttctccaaat
atgacttcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagt
aatcatgtgtcaccaaatagtcttcttcaaccctctgcagttcttgcacctaatcataca
aatcagactttatctgattttactgggagtaattccttttcacctcacaggggaatcaag
caagaatcgactcagcatatgctaaatcctaatacatcactgaattcaaataacttccaa
atgttgcattcatcacatcctcagggtaattacaattcaaaattatctcctgtgcacatg
aacttcccggatcctgttgactcaggaactcaaatgggccatttcagtgatcatgtagaa
actaatggcttttcatctttggaagagaatttacttcatcaagtggaatctcaaactgag
ccattcacaggacttgacccagaagacctccttcaagaaggtctccttccccagtttgat
gagtcagcatttgggcaagataattcaagtcatgttttagatcatgaccttgatcggcaa
tttacttcacatcttgtaacacggccttctgatatggttcaaactcagttgcacaatcag
gctcggagttggcattcatcactttctaatcatcagcatttacatgatagaaatcgcctg
tgtttacagcgacagcctccatcttccaagaagagtgatggttctgggacatacactaag
ttgcagaatacccaggtgaggatcatgtccgagaagaagcagagaaaaaaggtggaatca
gaaagcaagcaagaaaaggctaatcgtataatatcagaggccatagcaaaagcaaaggag
cgaggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcagtt
gaaggaaaagaggagaagaaaggaagaaggatgaaatccaagccaaaggacaaagagagc
aaaaaaacaaaaacttgttctaaattaaaagagaagacaaaaattggcaaactcattatt
acattgggtaagaaacaaaagagaaagaatgagtcttcagatgaaatatctgatgcagag
cagatgacacagcatgcattcaaagaggaagactctcaaaaaagaagatcaaatcgacaa
attaaaaggaaaaaatatgcagaagatgcagaagggaaacaatctgaagaagaggttaaa
ggctctatgaaaataaaaaagaattcagctcctttacctggtgaacagcctttacagtta
tttgtggagaatccaagtgaagaagatgctgcaattgtggacaagatactatcttctaga
actataaaaaaggaaatatcatctggagtgatgattgatacagaagaattttttgtaaaa
tacaagaattactcttatcttcactgtgaatgggccacagaacagcagcttctgaaagat
aaaaggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacatttt
tttgcagatatggaagaagaaccatttaacccagactacgttgaagtagacagagtgtta
gaagtctctttttgtgaagataaagatactggcgagcctgttatttactatttagtaaag
tggtgctcattaccgtatgaagatagtacttgggaactaaaagaagatgtagatcttgca
aaaatagaagagtttgagcaattgcaagcttcaaggcctgacacaagacatttggatcgt
cctcctcctaatatttggaaaaaaatagatcaatccagggattataaaaatggcaatcaa
ctcagggaataccaactggaaggactcaactggctcttattcaattggtacaatagacga
aactgcattttagcagatgaaatgggtcttggcaaaaccattcaatcaattacattcctc
tacgaaatccttctgactggtataagaggacctttcctgattattgctccactttctact
attgcaaactgggagagagaatttcgtacgtggactgatattaatgttgtggtttatcat
gggagcctgattagcagacaaatgatacagcaatatgagatgtacttcagggactcacag
gggcgtattattcgaggagcttacagattccaagccatcatcaccacttttgaaatgatt
cttggaggctgtggagagcttaatgcaattgaatggcgatgtgtaattattgatgaagca
cataggttaaaaaataaaaactgtaaacttctagaaggtctgaaactcatgaatctggaa
cacaaggtgcttttgactggcacacctctccaaaatacagttgaagaactattcagtctt
cttcactttctggagcccctaaggtttccttctgaatcaacgtttatgcaagaatttggg
gatctgaaaacagaggaacaggtgcagaaacttcaggctatcttgaaaccaatgatgttg
agacgattgaaagaagatgtggaaaagaagttggcacctaaggaagaaaccatcattgaa
gtagaacttactaacattcagaaaaaatactaccgggctattctggagaagaacttttca
tttttatccaaaggagcagggcagactaatgtacccaacttagtcaataccatgatggag
ctcaggaagtgctgtaatcacccgtatcttatcaaaggtgctgaggagaaaatacttgga
gaatttagagatacatataatccagctgcttctgattttcatcttcaagcaatgatccag
tctgctggtaaattggtccttattgataaattgcttcccaaaatgaaagcaggaggtcat
aaagtgctcatcttctctcaaatggtacgctgccttgatatcctggaggactatcttata
cataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaagct
gctatagatcgatttagtaaacctgattcggatcgatttgtctttcttctgtgtacccga
gctggtggattgggcatcaatttaactgcagctgatacatgtataatttttgattctgat
tggaatcctcaaaatgaccttcaggcccaagctcgttgccatagaattggtcagaataaa
gcagttaaagtctaccgactggtgactcgtaactcatatgaaagagagatgtttgaccga
gccagtctgaagctgggtctagataaggctgtgttacagagcatgagtggaagagaaagt
aatgttggtggtattcaacagctttccaaaaaggaaatagaagatctgcttcgaagaggt
gcttatggtgccattatggaagaagaagatgaaggttctaaattctgtgaagaagatatt
gatcagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtgggtcg
acatttgccaaggcaagttttgtggcatctggaaaccgaacagatatttcattagatgat
cccaacttctggcaaaaatgggcgaaaaaggcagaaatagatatagacgccatcagtggt
agaaacagcttggttattgacactccaagaattaggaagcaaacaagacccttcagtgcc
acaaaagacgagttagctgaattatctgaacccgaaagtgaaggagatgaaaagcccaaa
cttcggagaccctgtgagcgttcgaatggctatggaagaactgaatgctttagagtagag
aaaaatctgctagtttatggatggggccgatggagagagattctgtctcatggccgtttt
aaaaggcagctaaacgagcacgatgtagaaataatttgccgagccctcttagcatattgc
cttgttcactaccgaggagatgagaaaattaaaggcttcatatgggatctcattactcca
actgaagacgggcagacacgagagttacagaatcatctaggcctgtcagccccggtaccg
agaggtagaaaagggaagaaagtaaagactcaaacaagctcatttgatatacaaaaagca
gaatggcttcgaaaatacaatcctgagcaactacttcaagatgaaggctacaaaaaacat
ataaaacaccactgtaataaagttttgcttcgtgtaaggatgctgtattatctaaagcaa
gaagtcattggaaatgagtgtcagaaagtttttgatggagttgatgcaagtgacattgat
gtttgggtcccagaaccagaccactcagaagttccagctgagtggtgggattttgatgct
gataagtcactccttattggagtttttaaacatggttatgaaaaatataacactatccga
gcagacccggcattgtgcttcttggaaagagtgggaaaacctgatgagaaagcagttgct
gcggaacagagggcaaatgattatatggatggggatgtggaagatccagaatacaaacct
gccccagctatctttaaagatgatatagaggatgatgtttcctcaccaggagatcttgtt
atagcagatggagatggtcagctgatggagggtgataaagtttattggcctactcagtca
gctttaactacccgtttgaggcgtctcattactgcatatcagcgtactaataaaaacaga
caaatccagcagatacaacctactttccctgtgcctgccagtgttatgcagcctctttat
gaagaagccactcttaaccctaaaatggcagccaagatagaaagacagcagagatggaca
agaagagaagaagctgatttttacagagttgtatctacatttggagtggtatttgatcct
gacagaggccagtttgattggacaaaatttagggctatggctcggctacataagaaaact
gacgatagcttagagaaatatctgtacgcattcatgtcaatgtgtcggagggtttgtcgt
cttccttccaaagaagaattggtggatccaagtatttttatccagccaatcacagaagaa
cgtgcttctcggactttatatcgcattgaacttctaaggaaagtaagggaacaggccctc
cgacatccacaattgtttgagcgcttgaagctttgccatccaaatccagacttaccagtc
tggtgggaatgtggctctcatgatagggacttgctcattggagctgctaaacacggggtg
agccgaacagactatcatattcttcgggaccctgaactctcatttatggccgctcagagg
aactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaatat
caagtagcactttctgcttctcctcttacctctctacctaggctcctagatcctaaagct
gttattctagaggatgtgaaagttaaaagtgaaaaccttaaagaggagcctcagtcttct
gaagaagagtctatgtcttctgaggaaaccaggacactaataaagtctgagcctgtaagt
ccaaagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaggtgaa
acagacagacgcatggttgcagccagaacagagcctctaactccaaacccggcttctaag
aaacagcgagtccacaagagaggatcagagtctagttctgattctgactctgattctgag
agatcatcctgttcttccagatcatcttcttcctcgtcttcctcctcttcgtgttcccac
tctcgatcaggctctagctcttcttcttcctcctcttgttcttcagcatcatcttcatcc
tcatcctcatcttcctcttcctcatcctcctcctcatcttcgtcagaagaaagtgacagt
gaagaagaggaagtccaaaagcgagaaggtacccctcacatgaaagcctacgatgaagaa
agtgtcgcatcactgagcactacccaggatgagacccaggatagtttccagatgaacaac
gggaccgcagagtctgcttacatcctacagggtggatacatgctggcagcgtcatattgg
ccaaaggatcgtgtgatgatcaaccggctggacagtatttgtcaaacagtcctgaaaggg
aagtggccttcagctagaagaagttacgatgccaacgcagtggcttctttctataccaca
aagctgctggacagctctggtgcagcaacagaatatagcgagcccagcgcgccccctcct
gcaggtgccgcagtcaaagaagagcatgaccagtcaacacagatgtcaaaggaaggtggt
ttgaagttgacatttcagaagcaagggctcactcagagaaggccactggacagtgaagac
tgtgctcctgggcagcagcagtacctcactcgacttcgggaccttcaaggtgcgtcagag
agcagcctcgccagtttcccaaaatccctaccactatcaggtactcccattcaatcaacc
cttggtgccaatggagttttattagacaaccagcctgtagtcaaaaaaaggcggggaagg
aggaagaatgtagaaggtgttgacatcctcttttttaacagaaataaaccacctaatcat
gttacgttaggcttaaccacctcacagatttctacagggataaatccagcactgtcctat
actcaacctcaaggaattcctgatacagaaactcctgttccagttattaaccttaaagat
gggacaagacttgcaggcgatgatgcaccgaagagaaaggatttggaaaagtggcttaag
gagcacccaggttatgtggaagatttaggagcttttattcctcgaatgcaactccatgag
gggagacccaaacaaaaaaggcatcgctgcagaaaccccaataaattagatgttaatagt
ctcactggagaagaacgtgttcagctgattaacagaagaaatgccagaaaggttggaggt
gcatttgctccccctttgaaagatttgtgtcggttcctgaaagaaaatgcagaatatgga
gtagctcctgaatggggagatgttgttaagcagtctggatttcttccagaaagtatgtat
gaacgtattctcactggtcccgtggtaagagaggaagtaagcaggcgagggagacgacct
aaaagtggaattgcgaaggccacagcggcggcggcagctgcaactgccagcagtatttca
ggcaatcctttgttagccaatgggttactgccaggtgtggacctcacaactcttcaggcc
ttacaacaaaacctacaaaacttgcaatcactgcaagtgactgcagggctgatgggaatg
cctgctggcctttcttctggaggagaagctaaaaatgtggccgccatgttccccatgctg
ctgtcgggaatgactgggttgccaaatctgttgggcatgggagggctcctgacaaagccg
acagaatctggaacagaagaaaaaaagggaaatgactctaaggaggtggaagggaaaaaa
gaaaggacagagagccaaaaccccgagaacggcggtgaaaactctgtgtcaagttctcct
gcatcctctactgctgcgttaagtacagctgcagctgccagcccattagctctgaaccca
ctgttactatctaatattctttatccagggatgcttctcactccaggccttaatcttcat
attccaactttgtctcagtccaacacttttgatgtacagaaaaacaaaaacagtgactta
ggctcatctaagtctgtggaagtaaaggaagaagattccagagttagagatcaggaagac
aaagggggaactgaaccgagtcctctccatgaaaacagcacagatgagggttcagagaaa
gccgatgcttcatctggatctgatagtacatcatcgtcatccgaggattcagattctagt
aatgaagactga
DBGET
integrated database retrieval system
