Bos taurus (cow): 539501
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Entry
539501 CDS
T01008
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
539501 (HELZ)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
539501 (HELZ)
3'-5' decay
Other 3'-5' decay factors
539501 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PAM2
PhoH
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_16
AAA_7
Bac_DnaA
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
539501
NCBI-ProteinID:
XP_024836899
BGD-bta:
BT24733
Ensembl:
ENSBTAG00000004746
VGNC:
57142
UniProt:
F1MKC7
LinkDB
All DBs
Position
19:complement(63146894..63292860)
Genome browser
AA seq
1937 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMALQHCTEALLSLGQYSMADFTGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQPVSHILAKSLT
GESLNGMVTKDLTRLKTLLKETETATSNVLSGYHVEDLEEGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECVEGVKVEHDPGLSVTVNTKKSHQTWTFALTCKPARMLCRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAPNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIVDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRVKDNGVLFPDITMAPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKEFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRAQHAGNTNKPQQSPPKGKSLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPVPVPWTGYQGRFAVDPRIITHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHQEKDQHEQSRNGKSDTNNPGPEINKIRTPEKKPTEAKQIDLESNPQNRSPE
SRSGIVYPHPKFHRKDNLTPRHINLPLPAPHAQYAIPGRHFHPLPQLPRPPFPIPQQHAL
LNQQQSNLPEQPSPVPAQPSQVAPQLGPPPPQLSPAYPAGPGSAFFNNAVPHRPQSPPAE
AVVPEQQPPPVLQEGHSPLRALAQPGPILPSPLNSFPDESPPGLPMGEALDRMHGSVALE
TLRQQHVRLQQWSEHHAYLSQGSLPYPHHHHPHPHLQHLPQPPVGLHQPPVRADWKLPSS
AEDEAETTDSRFQDLLRELSNREQSETRELAEMPPPQSRLLQYRQIQTRSPPAAPSPPSG
ADHSTHFPNFTDSSRDLEVANSPAFPQRLPPPMFSSPFSLPSEHLTPPLKYLAPDGAWTF
ANLQQNHLMGPSFPYGLPPLPHRPPQNPFVQMQTHQPAVGQEPLQPLSSRTVSSSSLPSL
EEYEPRGPGRPLYQRRISSSSVQPCSEEASTPQDSLAQRKELQDHNNQSSFTFSSPESWV
NATSSTPYQNIPCNGSSRPAQPRELAAPPKTVKAPEEHLKPESLEGSSSFNYSVLQHLGQ
FPPLMPNKQIAESASSSSPQSSGGGKPAMSYASALRAPPKPRPPPEQAKKSSDPLSLFQE
LSLGSSAGSNGFYSYFK
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcatgtgaatcactgaagaggcag
gactatgagatggccctccagcactgcacagaggccctcctttctcttggccagtactcc
atggccgactttacggggccctgtccgctggagatagagagcatcaagatcgagagtctt
ctttatagaattgcctcctttttgcagctgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggagaaggactggccaagggagatggcgcctttcaggcagtgctttgc
tgcatgcagcttaaaggaaagctccagcctgtatcccacattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaaggctaaaaacacttctcaaa
gaaacagagacagcaactagtaacgtcctctctggatatcatgtggaagacttagaggag
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacggttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgctcagtgagtgtgtggaaggagtg
aaggtggagcatgaccccggtctgtctgtcaccgtcaacaccaaaaagtcccaccagacc
tggaccttcgctctcacctgtaagcctgcaagaatgctgtgtcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggagggaagatggccccaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgagtacctgatgcatgcaaaacaacagctagta
actacagctaaacgttgggattcttcttctaagactattgtagattttgaacctaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgtttacccagtccgttttagacaaatcattgaccaagaccaactatcagtcacggttg
catgaccttctttatattgaggagatagcccagtataaggaagtcagcaagttcaatctt
aaagtgcagttgcagattctagcaagcttcatgctcactggagtttctggaggtgcaaag
tacgctcagaatggacaactttttggtcgctttaagcttactgaaactctttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagaaaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattacgacacacaggttgaactccagtttcagttaaatcgattacccctc
tgtgaaatgcattatgcgctagacagggtcaaggacaatggggttttgtttccagacatc
actatggctccaaccataccttggagtcccaacaggcaatgggacgaacagttggatcct
cggctaaatgcaaaacagaaagaggctgttctggccattaccaccccactttcaatacag
ttgcctcctgtcctcatcatcggcccatacgggacgggcaaaacattcactctagctcag
gccgtcaagcacattctccagcaacaggagaccagcaggattctcatttgcacccattct
aatagtgctgctgatctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaaccgctgggtgaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattctgaaacaccgagtggtggtggttacattgaacacttcccagtacctctgt
cagctggacctcgaacctgggttttttactcacatcttgttagacgaggctgcccaggcc
atggagtgtgaaaccatcatgcctctggcactagcaactagacacacgcgggttgtcctg
gctggcgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagaggaac
cttcacgtgtcgttacttgatcggctctatgagcactaccctgccgagtttccctgtagg
atcctcctgtgcgagaactaccgttcccacgaagctatcatcaattacacctctgagctc
ttctatgagggcaagctgatggccagtggaaagcaaccagcacacaaggagttctatcca
ctaaccttctttacagcacgaggggaagatgtacaggagaaaaatagcacagctttttat
aataatgcagaggtatttgaagtggtggagcgagtggaagagctgagaaggaagtggcca
gtagcgtggggcaagttggatgatggaagtattggtgtggtgactccatatgcagaccag
gtgttcaggatacgcgccgaacttcgaaaaaagaggttatctgacgttaacgtagaaagg
gtgctcaatgttcaaggaaagcaattcagagttttgtttcttagcacagtacgtacaagg
catacttgtaaacataaacagacaccaattaaaaagaaggagcagctgctagaagactcc
acagaggacttggattatggctttttgtctaactacaagctcctcaacaccgccatcaca
agagcacagtccctggttgccgtggtgggggaccccatcgctctgtgctccattgggaga
tgcaggaaattttgggagcggtttattgccctgtgtcatgaaaacaatagcctgcatgga
atcacttttgaacagatcaaagcgcagctagaggctttagaactaaagaagacatacgtg
ttgaatccactggcacctgaatttataccccgggctctaagagcacagcacgcgggaaac
accaacaaaccgcagcaatcaccccccaagggaaaaagcctccatcatacccagaatgat
catttccagaatgatggaattgttcagcccaatccctctgtgcttattggcaatcctatc
agagcatatactcctccacctcctcttggacctcacccaaatttggggaaatctccaagt
cctgttcaaagaatcgatcctcacactgggacgagtattctttatgtacctgctgtctat
ggagggaatgtcgttatgtcggtgcctgtacctgtgccatggacaggataccagggcagg
tttgcggttgatcctcgaatcattacacaccaggcagcaatggcctacaacatgaacctc
ttacagacacatggacgtgggtctcctattccttatggccttgggcaccacccacctgtc
agcatagggcagccacagaatcagcatcaggagaaggatcaacatgagcaaagtcgcaac
ggtaaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaaa
aaacctacagaagcaaaacagattgatttggaatcaaacccacagaacagaagtcctgaa
tcacgttctggcattgtttatccccatcccaaatttcatcgcaaagataatctcacccca
agacacataaaccttcctctccctgccccccatgcccagtatgccatccccggtcgtcat
tttcatcccctcccccagctcccgagaccacccttcccaattccgcagcagcacgccttg
ctgaatcagcagcagagtaacttgcctgaacagccgagccccgtgccagcccagcccagt
caggtggcccctcagctgggcccgccgccgcctcagctctcccctgcctacccggctggc
cccggcagcgcgtttttcaataacgcggttccccaccgaccacagtccccgcctgcagag
gctgtggttcccgagcagcagcccccacccgtgctgcaggagggccacagtcccctgcgg
gccctcgcacagcccggccccatcctgccttcacctctgaacagcttcccggacgagagc
cccccgggcctgccgatgggggaggctttggatcgtatgcacgggagtgtggctctggaa
accctgaggcagcagcatgtgcggctacagcagtggagcgagcaccacgcctatctcagt
cagggcagcctcccgtacccgcaccatcaccaccctcacccacacctccagcaccttccc
cagccgcccgttggattgcatcagcccccagtgagagcagactggaaactccccagcagt
gccgaagatgaagcagaaacaactgactcacggtttcaagacttactcagagaactgtct
aatcgtgagcaaagtgaaacacgggaactagctgaaatgccaccacctcaatcaaggctt
ttgcaatatagacaaattcagactaggagcccaccagcagccccctcgcccccgtccggc
gcagaccacagcacccactttccaaacttcactgacagcagcagagaccttgaagtggcc
aacagcccggcgttcccacagcgcctgccgcccccgatgtttagctctcctttctcgttg
ccatctgagcacctcacccctcctctgaaatacctggcgcctgatggagcttggactttt
gctaacttacagcagaatcacctgatggggccgagtttcccctacggcctacctccattg
cctcacaggcccccgcagaaccctttcgtgcaaatgcagacccaccagcccgctgttggc
caggagccgctccagccgctgtcctctcggacagtgtcgtcctcttcgctccccagctta
gaagagtatgaacccagaggaccgggtcggcccttgtaccaaagaagaatctcatctagc
tcagtgcagccttgttctgaagaagcaagcactcctcaagacagtcttgctcagcgtaaa
gagcttcaggaccataataaccagtcttctttcaccttttcctccccggagtcctgggta
aacgccacctcatccaccccctatcagaacattccgtgcaatggatccagcaggccagcc
cagcccagagagttggcagctccacccaagaccgtcaaagcccccgaggaacatctgaag
cctgagagccttgaggggtccagttccttcaattacagcgtgctgcagcatctcggccag
ttccccccgctcatgcccaacaagcagatcgccgagtcggccagcagcagcagcccgcag
agctccgggggcggcaagcctgccatgtcctacgccagcgccctgcgggcccctccaaag
cccaggcccccgcccgagcaggccaagaagagcagcgaccctctgtctctgtttcaagaa
ctcagcctggggagctcagccggcagcaatggcttttactcctattttaaataa
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integrated database retrieval system
