Bos taurus (cow): 539507
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Entry
539507 CDS
T01008
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein
KO
K23625
ataxin 2/2L
Organism
bta
Bos taurus (cow)
Pathway
bta05014
Amyotrophic lateral sclerosis
bta05017
Spinocerebellar ataxia
bta05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
539507 (ATXN2L)
05017 Spinocerebellar ataxia
539507 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
539507 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
539507 (ATXN2L)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
539507 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
539507
NCBI-ProteinID:
NP_001192459
BGD-bta:
BT17664
Ensembl:
ENSBTAG00000032087
VGNC:
26341
UniProt:
A0A3Q1MR95
LinkDB
All DBs
Position
25:complement(25974054..25985872)
Genome browser
AA seq
1100 aa
AA seq
DB search
MLKPQPPQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGSLASTSAPPGPPAAASPCLG
PAAAAGSGLRRGAEGILAPQPPAPQQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYN
NSRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKVSEPAGGPRREDI
VDTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSD
DYDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQL
AREIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLAAREGKYIPLPQRVREG
PRGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGA
KTLSSPSSRPSGEASVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPMGSAVPTSSASIP
VTSAVGDPGVGSVSPASPKISLAPTDVKELPAKEPGRTLESQELSRIAAKVPGLQNEQKR
FQLEELRKFGAQFKLQPSSSPETSLDPFPPRILKEEAKGKEKEVDGLLASEPLGSPVSSK
AESVSDKEDKLPLPAAGGAEGPEQPPAPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTL
NPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHM
GPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPL
VAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSS
TPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPPSQHAAPSPVQHQA
GQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHAHQQLPHGF
TNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSAST
PSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLSCD
PAAPLPTASPALSDPDCLLT
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagacctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcgccctcccgggggcaccagcccgcccaacggcggtctcccgggg
tccctggcctccacctcggctcccccaggacctcctgcggccgcctccccctgcctgggg
cctgcagccgctgccgggagcgggctccgccggggagccgagggtatcttggcgcctcaa
ccgccggcaccgcagcagcaacatcaggagaggccaggggcagcggccatcggcagcgcc
aggggacaaagcacaggaaagggacctccacagtcaccggtgtttgagggtgtctacaac
aattccagaatgctgcatttccttaccgctgttgtgggttccacttgtgatgtaaaggtg
aagaacggtaccacctatgagggtatcttcaagacgctgagctcaaagtttgaactggca
gtggacgctgtgcaccggaaggtatcggagccagcgggtggccctcgtcgggaagacata
gtggacaccatggtgtttaagccaagtgatgtcatgcttgtccacttccgaaatgtcgac
ttcaattatgctactaaagataagttcactgactcggccattgccatgaactcgaaggtg
aatggggagcacaaagagaaggtgcttcagcgctgggagggcggtgatagcaacagtgat
gactacgacctggagtctgacatgtctaatggatgggaccccaacgaaatgttcaagttc
aatgaggagaactatggtgtaaagaccacctatgacagcagtctctcttcttacacggtg
cccttagagaaggacaattcagaagaattccgtcagcgggagctgcgtgctgcccagttg
gcccgagagattgaatcgagcccccagtaccgcctgcggatcgccatggagaatgatgat
gggcgcacggaggaggagaagcacagtgcagttcagcgacagggctcagggcgtgagagc
cccagcttggcagccagggagggaaagtatatccctctaccccagcgagttcgggaaggt
ccccggggaggcgttcgctgcagtagttctcggggcggccggcctggccttagctctttg
ccgcctcgtggccctcaccatcttgacaatagcagccctggcccaggttctgaggcacgc
ggtatcaatggaggcccttcccgcatgtcccctaaggcccagcgacctctgagaggtgcc
aagactctgtcttcccccagcagcaggccttctggagaagcctctgttccacctcctcct
gcagtgggccggatgtacccgccgcgctctcccaaatcagctgcccccgccccaatctca
gcttcctgtcctgagcctcccatgggctcagcagtaccaacctcttcagcttccatccca
gtgacatcagcagttggggatcctggagtaggctccgtttccccagcttctccaaagatc
tcactggcccccacagatgtaaaagaactcccggccaaggaacctggaaggacgctggag
tcccaggagttgtcccggattgcagcgaaagtccctggccttcagaatgaacagaagcgt
tttcagctggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcc
cctgagaccagcttggatccttttcctccacggatcctgaaagaggaggccaaagggaag
gagaaggaggtggatggtcttttggcttcagagcccctggggtctcctgtttcctcgaag
gccgaatcagtatcggacaaggaggacaaactgcccctgccagcagcagggggtgccgag
gggccggagcagcctccggcaccttgcccaagccaaactggcagccccccagtgggcctc
atcaagggagatgacaaggatgagggcccagttgctgaacaagtaaagaagtcaacattg
aaccccaatgccaaggagttcaatcccactaagcccctgctctctgtgaataaatccacc
agtactccgacttctcctgggccccggactcattcaactccctccatcccggtgctgaca
gcaggccagagtgggctctatagcccccagtacatttcctacatacctcagatccacatg
ggaccagctgttcaggcaccgcagatgtatccttatcctgtgtccaactcagtgcctgga
cagcagggcaagtaccggggcgccaaaggctccctgcccccccagcgctcggaccaacac
cagccagcctccgcccctcccatgatgcaggctgccgccgccgctgccggtccacctctg
gtggccgccaccccttactcttcctacatcccctacaacccacagcagttcccaggccag
cccgccatgatgcagcccatggcccactatccctcgcagccggtgtttgcccccatgctt
caaagcaacccacgcatgctgacgtcggggagccatccccaggccatcgtgtcatcctcc
acccctcagtacccttctgcagagcagcccaccccccaggccctttatgccaccgttcac
cagtcctatccgcaccatgccacgcagctccatgcccaccagccgcagccggccaccacg
cctactgggagccagccgccgtcccagcatgcggcccccagtcctgtccagcaccaggcg
gggcaggccccacacctgggcagtggacagccgcagcagaacctgtaccacccaggggcc
ctgacaggcacgccgccttctctgccaccgggaccttctgcccagtcccctcagagcagc
ttcccccaaccagccgctgtatatgccatccatgcccaccagcagctgccccacggcttc
accaacatggcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccc
cctcaccctggggctccccacccgccccaggtgatgctgctgcacccaccccagagccat
gggggccccccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccaca
ccctcaccctatccctacatcggacacccccaaggtgagcagcctggccaggcgcctgga
tttccaggaggagccgatgacaggattctatgtagggtgggcagaagccacagtcgccgc
cgccaggggcttgctcctggctctgtcctttgcttccctccgtcctcgctcagttgtgat
ccagcagcccccctccccactgcctccccagctctcagtgaccccgactgtctcctgact
tag
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