Bos taurus (cow): 539718
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Entry
539718 CDS
T01008
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bta
Bos taurus (cow)
Pathway
bta04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
539718 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bta04040
]
539718 (SCN2A)
Ion channels [BR:
bta04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
539718 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
539718
NCBI-ProteinID:
NP_001137581
BGD-bta:
BT26708
Ensembl:
ENSBTAG00000038180
VGNC:
34347
UniProt:
A0AAF6DLH1
LinkDB
All DBs
Position
2:complement(30880623..31019443)
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AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDESGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFELNITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESREFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIDSNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGEGTPIKEDILIDKLNENSTPEKTDMTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaggatgatgaaagtggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacattcctccagagatggtgtcagagccgctggaggat
ctggatccctattatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggacccatggaattggttggatttcacagtcattact
tttgcatatgtgacagaatttgtggacctgggcaatgtctcagcgttgagaaccttcaga
gttctccgagctttgaaaacaatttcagtcattccaggcctgaagaccattgtgggggcc
ctaatccagtcggtgaagaagctctcagatgtaatgatcctgactgtgttctgcctgagc
gtgtttgcactaataggattacagctgtttatgggcaacctgcgaaacaaatgtttgcaa
tggcccccagataattcttcctttgaactaaacatcacttccttctttaataactcattg
gatgggaacggtaccactttcaataggacagtgagcatgtttaattgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctctgatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaacccc
aactatggctacacaagctttgacacctttagctgggctttcctgtccttatttcgtctc
atgactcaagacttctgggaaaacctttatcagctgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctccttctatctaataaatttgatc
ctggctgtggtggccatggcctatgaagaacagaatcaggcaacgctggaagaggctgaa
cagaaagaagctgaatttcagcagatgcttgaacagcttaaaaagcaacaagaagaagct
caggcagcagctgcagcagcttcggctgaatcaagagagttcagcggtgctggtgggatc
ggggttttctcagagagttcttcagtagcatcaaaattgagctccaagagtgaaaaagag
ctgaaaaacagaaggaagaagaagaaacagaaagaacagtctggagaagaagaaaaggaa
gatggggtccgcaaatctgaatctgaagacagcataagaagaaaaggtttccggttttct
ttggaaggaagcaggctgacatatgaaaagaggttttcctctccacatcagtctttactg
agcatccgtggctccctgttctctccaagacgcaacagtagggcgagccttttcagcttc
agaggccgagccaaggatattggctctgagaatgattttgcggatgatgagcacagcacc
tttgaggacaatgacagcagaagagactctctgtttgtgccgcacagacatggggagcgg
cgccacagcaacgtcagccaggccagccgtgcctccagggtgctccccattctgcccatg
aacgggaagatgcacagcgctgtggactgcaacggagtggtctccctggttgggggccct
tctgccctcacatctcctgctgggcagctcctaccagagggcacaactactgaaacagaa
ataagaaagagacggtccagttcttatcatgtttccatggatcttttggaagatcctaca
gcaaggcaaagagcaatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccgtgctggtataaatttgctaacatgtgtttgatttgg
gactgctgtaagccatggttaaaggtgaaacatgttgtcaacctggttgtgatggaccct
tttgttgacctggccatcaccatctgcattgtcttaaacaccctcttcatggccatggag
cactatcccatgacggagcagtttagcagtgtgctgtcagttgggaacctggtcttcact
gggatcttcacagcagaaatgtttctcaagataattgccatggatccatattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggactgtcagttctccgatcatttcgactgcttagagttttcaag
ttggcaaaatcctggcccaccctgaatatgctaattaaaatcatcggcaattctgtaggg
gctctgggtaacctcaccctggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctccctcgctggcacatgcatgacttcttccactccttcctgattgtgttccgggtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttccta
gccttactcttgagttcattcagttctgacaatcttgccgccactgatgatgataatgaa
atgaataatctccagattgctgtgggaaggatgcaaaaaggaatcgattttgttaaaaga
aaaatacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatt
aaacctctggaagatctaaataacaaaaaagacagctgtatttccaaccataccacgata
gaaataggcaaagacctcaattatctcaaagatggcaatggaactaccagtggcatcggc
agcagtgtagaaaagtatgtcgtggatgaaagtgattacatgtccttcataaacaacccc
agcctcactgtgactgtaccaattgctgtcggagagtctgactttgaaaatttaaatact
gaagaattcagcagcgagtcagatatggaagaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggggaacaacctgaagct
gagcctgaagaatctctggagcctgaagcctgttttacggaagactgtgtgcggaagttt
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacttgagaaaa
acttgctataagatagtggagcataactggtttgaaaccttcattgtcttcatgattctg
gtcagcagtggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttatatattcatcctggaaatgcttctc
aagtgggttgcatatggctttcaagtgtattttaccaatgcctggtgctggttagatttc
ctgatcgtcgatgtctcattggttagcttaactgcaaatgctttgggatactcagaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccgctgagagccttatcccgg
tttgaaggaatgagggtcgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgcctgatcttttggttgatattcagtatcatgggagtgaatcttttt
gctggcaagttttaccactgtattaactacaccactggagaaatgtttgatgtcagcgtg
gtcaacaattacagcgaatgtaaggccctcatagatagcaaccaaactgcccggtggaag
aacgtgaaagtcaactttgataatgtgggacttgggtatctttctctgcttcaagtagcc
acatttaaaggatggatggatatcatgtatgcagcagttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctgtattttgtcatctttattattttt
ggttcattctttactctaaatcttttcattggtgtcatcatagataacttcaaccagcag
aaaaaaaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcgatgaaaaaattgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaagggatggtctttgatttcgtaaccaaacaagtctttgatatcagcatcatgatc
cttatctgcctcaacatggtcaccatgatggtggagactgacgaccagagtcaagaaatg
accaacattctgtactggattaatctggtgtttatcgttctgttcactggagaatgtgtg
ctgaaactgatctctcttcgttattactatttcaccatcggatggaatatttttgatttt
gtggtggttattctctccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccttgttccgagtgatccgtcttgccaggattggccgaatcctgcgtctg
atcaaaggggctaaggggatccgcacgctgctctttgctttgatgatgtcccttcctgcg
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctatgccatctttggaatg
tccaacttcgcatatgttaagagggaggttggaattgatgacatgtttaactttgagacc
tttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggacggattg
ctagcacctatcctcaacagtggacctccagactgtgaccctgaaaaagatcaccctggc
agctcagttaagggagactgtggaaacccgtctgttgggattttcttctttgtcagttat
atcatcatatcatttctggttgtggtgaacatgtatattgctgtcatcctggagaacttc
agtgttgctactgaagaaagcgcagagcccctgagtgaggatgactttgagatgttctac
gaggtttgggagaagtttgatcccgatgccacccagttcatagagttctccaagctctct
gattttgcagctgccctggatcctcctcttctcatagcaaaaccgaacaaagtccagctc
attgccatggacctgcccatggtcagtggggacaggatccactgcctcgacatcttattt
gcctttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatccagatg
gaagaaagattcatggcatcgaacccctccaaagtctcctatgagcccattacaaccact
ctgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaagtttcatgtatatacaagaaagacaaaggcaaagaa
ggtgagggaacacccatcaaagaagatatcctcattgataaactaaatgagaattcaact
ccagagaaaaccgacatgaccccttccaccacgtctccaccttcctatgacagtgtgacc
aaacccgagaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagcaaaaagtaa
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