Bos taurus (cow): 539858
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Entry
539858 CDS
T01008
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bta
Bos taurus (cow)
Pathway
bta04140
Autophagy - animal
bta04211
Longevity regulating pathway
bta05010
Alzheimer disease
bta05014
Amyotrophic lateral sclerosis
bta05016
Huntington disease
bta05017
Spinocerebellar ataxia
bta05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
539858 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
539858 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
539858 (RB1CC1)
05014 Amyotrophic lateral sclerosis
539858 (RB1CC1)
05016 Huntington disease
539858 (RB1CC1)
05017 Spinocerebellar ataxia
539858 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
539858 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bta01009
]
539858 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
539858 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
bta03029
]
539858 (RB1CC1)
Protein phosphatases and associated proteins [BR:
bta01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
539858 (RB1CC1)
Membrane trafficking [BR:
bta04131
]
Autophagy
Autophagosome formation proteins
ULK complex
539858 (RB1CC1)
Mitochondrial biogenesis [BR:
bta03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
539858 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
539858
NCBI-ProteinID:
NP_001107627
BGD-bta:
BT19837
Ensembl:
ENSBTAG00000000878
VGNC:
33769
UniProt:
E1BH45
LinkDB
All DBs
Position
14:complement(21492812..21532972)
Genome browser
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRVDSLPEREGSEKSETKTSTEL
VLSPDTPAATSKPSFTSFHMSVEHVASDAADAESGKDVREPCPSPAQQDAAAIEAKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFMAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQSASSPRLESATG
ITTTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEHTLHQASLDL
DSLAESPESDFMSAVNEFVIEEQLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
APGQEDLGDRASLSVQLGRCRASARDSHLSIQTLKEDFCHFRTFVQKEQCDFANSLQCTA
VEIRSIIDKVKHSLEITLYEKHQKELESLKSEYEGRLATLVKESEENKSKITKLRGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQKEKDQKLLEMECTVHAQHCEMEALRQSREVALED
LRKLHVENDEKLQLLRAELQRLEQSHLKELEDTLQVRHTQELEKAMNEHRLCLEKLEMEN
QQRIEQIQDSHAAVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKMLLEES
RTQEKKTLQSLFEKETEQLRAEISKLNQKIHDNNENYQVGLTELRTLMTVEKDQCISELI
SRHEEESDRLTTDLNKMTSLYQQAFEIEKGLKEELAELQSKLDSELSALEKQKDEKISQQ
EDMYKAIIQKLEKDKEEFVMRQEQDREQLVQRLNCEKEAAIETARKEMHLEREAVEKELL
EKVKHLESQLAKSHAMESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKRLEEEVSRLRGGAFVPSPGVAAAPELYGACAPEPPVEALDTFAEGRPDSAMETSTMSV
QENVHVLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHAESLPALDLRPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaaccaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgcgatccacagcaagtacaagattgccatt
cagcaccaggtgctggtggtcaacgggggcgagtgcatggctgccgaccgcagggtgtgc
acctacagcgctgggacggacacaaatccaatttttctttttaacaaggaaatgatcttg
tctgagcgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtcccttatgatgcctgccgtttttcacactgttgcttcaaggacacaa
cttgcggtggaaatgtatgaagttgccaagaaactctgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaagattgc
tcaaattcctaccaaaagctgcttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaagacatcaaattaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattccactgttggagtgcctcaccagacacagttacagggaatgtctggggagagtg
gattccttgcctgaacgcgaaggctcagaaaagtctgagacaaagacctccactgaactg
gtgctctctcctgatacgcctgcagcaacgagcaaaccctcgttcacctcatttcacatg
tccgtggagcacgtagcctcagacgccgcagatgctgaaagtggaaaagatgtgagggag
ccttgtccaagccctgcccagcaggacgcagctgcaatagaggctaaagagggggacctg
cctttctttaatgtttctctgttggactggatcaacgtgcaggacaggcctaatgatgtc
gagtccttggtcaggaagtgctttgattccatgagcaggcttgatccccggatcattcga
ccctttatggccgaatgccgtcagactattgccaatctcgataatcagaacatgaaagcc
atcaagggcctggaggaccggctgtacgccctggaccagatgattgccagctgcggccga
ctggtcaatgagcagaaagaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgctacctgatttgtgtctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaagctgttggacattaaacagaagtgcaccactgccaaa
caggagctcgcaaataaccttcatgtcagactcaagtggtgttgctttgtgatgctccac
gcagatcaggatggagagaagttgcaggctttgctccgcctggttatcgagctcttagaa
agagtcaagatcgtagaagctctgagcacagttcctcagatgtactgcttagctgttgtt
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggccggtgctttagtc
aaggacggaaagcaattgtatgaggctgagaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcttttctaagaaatcgtctgttcaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttctgaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctccaccagcatgtacttgctctgcataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagacctgctgagtgaacaaaaggcc
tctgcgagtcagacgtccccgcagtcggcttcctcgccccggctggaaagcgcgacagga
atcacaaccactacctcacccaggacaccgcctccactcgccgtgcaggatcccctgtgt
cctgcagtttgccccttagaggagctgtcaccagacagcattgatgcccacacgttcgac
tttgagactatcccccatccaaatatagagcatactctccaccaggcctccttagacttg
gattcactagcggaaagtcctgagtcggactttatgtctgcggtgaacgagtttgtcata
gaggagcagctatcgtctccaaaccccatcagtgacccgcagagcccagagatgatggtg
gagtccctctactcctctgtcatcaacgccattgacagtaggcggatgcaggacaccagt
gcccctggtcaggaggacctgggcgaccgcgcgtccctcagtgtccagctggggaggtgc
cgcgcgtccgcccgcgactcgcacctcagcattcagaccctgaaggaggacttctgccac
ttccggacgttcgtgcagaaggaacagtgcgactttgccaattccttgcagtgtacagca
gtagaaataagaagcattatcgacaaagtaaagcactctttggaaataacactatatgaa
aaacatcaaaaagaactagagtctttaaaaagcgagtacgagggcaggctcgctaccctg
gtgaaggagagtgaagagaacaagagcaagatcaccaagctgcggggggacctggtatgc
ctggaggaggtgctgcagaataaggataatgagtttgctctggtcaagcatgagaaggaa
gctgtcatctgcctgcagaaagagaaggaccagaagctgctcgagatggagtgcacagtg
cacgcccagcactgtgagatggaagcactgcggcagtcgcgtgaggttgctctggaggac
ttgaggaagctccacgtggagaatgacgagaagctccagctactgcgggcagagctccag
cgcctggagcagagtcatctgaaggagctggaggacacactgcaggtccgtcacacacag
gagttggagaaggccatgaacgagcacaggctctgcttggagaaactagagatggaaaac
cagcagaggatcgagcagatccaagattctcatgctgcagtcatccaggagaaggagcag
cagctccaggagttaaagctcaaggtttcagatttgtcggacatgagatgtaagttagag
gtggagctggctctgaaggaagcagaaactgatgagataaaaatgttgctggaagaaagc
agaacccaggagaagaagaccttgcagtctctcttcgaaaaagagaccgaacagttgaga
gcagagatcagtaaactaaaccaaaagattcacgacaataatgaaaattatcaggtgggc
ttgacagagctgagaactttaatgacagttgaaaaagatcagtgcatttctgagttaatt
agtagacatgaagaagaatctgataggcttaccactgatttaaacaaaatgacatcattg
tatcagcaagcatttgaaatagaaaaaggcctgaaagaagaattagctgaactgcagagt
aaattggactcagaattgagtgctcttgaaaaacaaaaagatgagaaaatctcccagcaa
gaggatatgtacaaagctattatccagaagctagagaaagacaaagaggaatttgtcatg
agacaggaacaggaccgagaacagctagttcagaggcttaattgtgaaaaagaagctgct
attgagactgccagaaaagaaatgcacttggaaagagaagctgttgagaaagagttgtta
gagaaagttaaacatcttgagagtcaattagcaaaaagtcatgccatggaatctgccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagctaag
tttctagaacaacttgaagagcaggagaaaaggaagaatgaggagatgcagaatgttcga
acatctttgatcgctgagcagcagaccaattttaacactgttttaacgagagagaaaatg
aggaaagaaaacataatcaatgatctcagtgataagctcaagagcacaatgcagcagcag
gagcgggacaaagatttgatcgagtccctgtctgaggaccgcgcgcgtctgctggaggag
aagaagcgactggaggaggaagtcagccggctgcggggcggcgccttcgtgccctccccg
ggcgtggctgcagccccggagttgtatggggcctgtgcacccgagcccccggtggaggcc
ctggacacctttgccgaggggaggccagactcagccatggagaccagcacgatgtctgtc
caagaaaacgtccacgtgctctctgaagaaagacagcggataatgctgttggaacgaaca
ctacagttgaaagaagaagagaacaagcggttaaatcagagactgatgtctcagagcatg
tcttccgtatcctcgaggcattctgagaagatagccattagagatttccaggtgggcgac
ctggtgctcatcatcctggacgagcgccacgacaactatgtgctcttcacggtgagcccc
accctgtacttcctgcacgcggagtccctgcccgccctggacctcaggccgggagagggc
gcttcaggtgcgtctcgaagaccgtgggtccttgggaaagtgatggaaaaggagtactgc
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcatggaataagaaagtataa
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integrated database retrieval system
