Bos taurus (cow): 540004
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Entry
540004 CDS
T01008
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta05014
Amyotrophic lateral sclerosis
bta05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
540004 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
540004 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
540004 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
540004 (NUP98)
03036 Chromosome and associated proteins [BR:
bta03036
]
540004 (NUP98)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
540004 (NUP98)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
540004 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
540004
NCBI-ProteinID:
XP_002693474
Ensembl:
ENSBTAG00000008432
VGNC:
32367
LinkDB
All DBs
Position
15:51264911..51351804
Genome browser
AA seq
1799 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQTTSLFSKPFAQPTTTQTTGFS
FGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGASLFGQTSTGFGAVG
STLFGNNKLTTFGTSTTSAPSFGTTSGGLFGFGTNTSGNSIFGSKPGPGTLGTGLGAGFG
TALGAGQASLFGNNQPKLGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQQ
AVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPAT
RVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSSLFSPVNRDS
EDLASPSDYPENGERFSFLSKPVDENHQQDGEDDSLVSRFYTNPIAKPIPQTPESAGNKH
NSSNSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDREEIENNTYHIHPAGIILTK
VGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKE
VIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQATPF
QMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSMLEESVPEDQEPVSAST
HIASSLGINPHVLQIMKASLLADEEDVDTVLDQRISHLPSKADTSQEICSPRLPISATHS
SKPRSLVSGLLQSKFTSGTFLSPSASLQECRTPRTSSLMNIPPTSPWSVPPPLTSVFTVP
SPAPEFQLKTVGTRRQPGLVPLKKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGE
QLSGSLELENHQIADCMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKLDKDLQLYQTS
LELKLKHSTVHVDELCPLIVPNPGVAVIHDYADWIKEASRDLLEPQIVKHWSLTWTLCEA
LWGHLKELDSQLDEPSEYIQILERRRAFSRWLSSTASPQIEEEVSLTRKDNPMEAVFSYL
TGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQEERLRI
FALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISKALSMYEEAFQNTSD
SDRYACCPLPSYLEGSGYVVEEEQDSQRPLQDVCFHLLKLYSDRHYDLNQLLEPRSVTAD
PLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSSTR
EKAVRELLTRHCQLLETPESWAKETFLTEKLCVPAEWIHEAKAVRAHMESDKHLEALYLF
KAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPLERSGLIQDWETSGLVYLDYIR
VIEMLRHIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRVANLLRVV
LSLQHASDTTSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacgccctttgggggtggcactggtggctttggcacaact
tcaacatttgggcagaatactggatttggcactactagtggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggcctgtttggaaattcacagaccaaaccagga
ggcttatttggtaccaattcatttagccagccagctacctccacaagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaactgcaagcacaggaaccagc
ctcttctcatcccaaaacaatgcctttgcacaaaataagccaacgggctttgggaatttt
ggaacaagtaccagcagtgggggactttttggaactacaaacaccacctctaatcctttt
ggtagcacatctggctctctctttgggccaagtagttttacagctgctcctactgggact
actattaagtttaaccctccaactggtactgatactatggttaaagctggagttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtcacta
gaggagcttcgtttagaggattatcaggccaaccggaaaggcccacagaatcaggtggga
gcaggtaccacgactggcttgtttgggtcttctccagccacctccagtgcaacaggactc
ttcagctcttccacaacgaattcaggctttgcatatggtcagaacaaaacagcctttgga
actagtacaactggatttggaacaaatcctggtggtctctttggccaacagaatcaaact
accagtctcttcagcaaaccatttgcccagcccacaaccacccagaccactggtttttcc
tttggtaataccagcacactaggacagccaagcaccaacaccatgggtctatttggagta
actcaagcctcacagccaggaggtctttttgggacagctacaaacaccagcactgggaca
gcatttggaacaggagctagtctctttgggcagaccagtactggatttggtgctgttggt
tcgaccctgtttggaaataacaagcttactacgtttggaaccagcacaaccagtgctcct
tcatttggtacaaccagtggcgggctctttggattcggcacaaataccagtgggaatagt
atttttggaagtaaaccaggacctggcactctggggactgggcttggcgcaggatttgga
acagctcttggtgctggacaggcatctttgtttgggaacaaccaacctaagctcggaggg
ccccttggtacaggagcctttggggcccctggatttaatacaacgacagccactttgggc
tttggagccccccaggccccagtagctttgacagatccaaacgcttccgctgcccagcag
gctgttctccaacagcacatcaatagtctgacatactcacctttcggagactctcctctc
ttccggaatcccatgtcagaccctaagaagaaagaagagagattgaaaccaacaaatcca
gcagcccagaaggctctcactacgcctactcattataaactgacaccccgccctgccacc
agagtccgaccaaaggctttacaaacaacaggcacagccaagtcacatctttttgatgga
ctggatgacgatgaaccatccttagccaatggagcattcatgcccaagaagagcattaag
aagttggttttgaaaaaccttaacaatagcagtctattctctcctgttaatcgtgattca
gaagatctagcttcaccatctgattatccagaaaatggagagagattcagttttctgagc
aaaccagtggatgagaatcatcagcaggatggagaagatgattctcttgtgtcacgtttt
tatactaaccctattgccaaacccattcctcaaaccccagaaagtgctggaaataaacat
aacagcagcaacagtgtagatgatactatcgttgcattaaacatgcgtgctgccttgcga
aatggactggaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggatgac
cgagaagaaattgaaaataatacttaccatatacatccagcaggcatcattctcactaag
gttggctactatactattccatccatggatgaccttgctaaaattaccaatgaaaaagga
gagtgcattgtctctgacttcactattggtcgtaaaggttatggttcgatctattttgaa
ggagatgtgaatttgacaaatctaaatttagatgacattgtacatatccgaaggaaagaa
gtgattgtctacttagatgataaccaaaaaccacctgtgggtgaaggactaaatagaaag
gctgaggttacattggatggagtttggccaacagataaaacatctcgttgtttaataaag
agcccggatcgacttgctgatatcaactacgagggaagattggaagcagtttcaaggaaa
cagggagctcagttcaaagagtaccgtcctgaaacaggttcttgggtgtttaaggtctct
catttttctaagtatggtcttcaggattctgatgaagaggaggaggaacggccatccaaa
actagtacaaagaagttgaagactgcccctttacctcctgcaggccaggccaccccattc
cagatggctcttaatggcaaaccagcacctccaccccagagccagagcccagaggtggag
cagttagggagggttgtggaactggacagtgacatggtagatatcacccaggagccagtt
ctggattccatgttagaagagagcgtgcctgaggatcaggaacctgtgtccgcctcaaca
cacattgcatcttcactgggaattaatccacatgtgttacagatcatgaaagcatcattg
cttgctgatgaagaagatgtagatacggtcctggatcagcgcatcagtcaccttccttct
aaagcagatacttctcaagaaatatgttctcccaggctccccatctcagcaactcactca
tcaaaacctcgttcattagtaagtgggttactacaatcaaaatttacaagtgggactttc
ctttcaccaagtgcctctttacaagaatgtcgtactcccagaacatcatcgttgatgaat
ataccgcccacatccccttggtctgttcctccacccttgacttctgtgtttacggtgccc
agcccagcccctgagtttcagttgaaaacagtgggtacccgcagacaaccaggcctagtc
cctcttaaaaagtctgtcacctatggaaaggggaagctcctgatggacatggccctattt
atgggacgatcatttcgggttggttggggccccaactggacgcttgctaatagtggagaa
cagctgagtggttctctggaactggaaaatcatcagattgctgactgtatggaatatgga
ttcctgcctaatccagtagctgttaaatccctaactgagtctccattcaaagttcatttg
gaaaaacttagtttgaggcaaaagaagctggacaaagacctgcaattataccagacatct
ctggagcttaaattaaaacatagcactgttcacgtggatgagctgtgtcctcttattgtc
cccaatccgggagttgctgtcattcatgactatgcagattggattaaggaagcatcgaga
gatttattggaaccacaaattgtgaagcactggagcctaacgtggacattatgcgaagct
ctgtggggccacctaaaggagcttgatagccagctggatgagcccagtgaatacattcag
attctggagcgaaggagagctttttctcgctggctgtccagtactgcctcacctcaaatt
gaggaagaagtctccttgacccgaaaagacaaccctatggaggctgtcttcagctacctc
acgggcaagaggatcagtgaggcctgctccctggcccagcagtcaggtgatcatcgtctt
gctcttcttttatcccagttggttggcagccaatcagttcgtgagctgcttactatgcag
ctggtggattggcatcaactccaggctgactgcttcatccaggaggagagactgcgcatc
tttgccctcttggctggaaaaccggtgtggcagctctcagagcagaagcaaatcaatgtg
tgctcccagttggattggaaacgctccctggctgtccatctttggtatttgcttccacca
acagcttccatttccaaggcgctcagcatgtatgaagaagcatttcagaatacctctgat
agtgacagatacgcctgctgtccacttccctcatacctggagggctctggatatgtggta
gaggaggagcaagactcacagagacctcttcaagatgtctgctttcaccttctaaaactc
tacagtgacagacattatgacctcaaccagctgctggagcctcgaagcgtaactgcggat
cctttggactatcgcctaagctggcacttgtgggaggtgctgcgggctcttaactatacc
catctctcagagcagtgtgagggtgtgctgcaggccagttatgctggccaactggagagt
gagggcctttgggagtgggccatctttgtcctcctgcacattgacaactcaagcacgcgg
gagaaggctgttcgagagctgcttacccggcactgccagctgttggagacccctgaatct
tgggctaaggagactttcctgaccgagaagctttgtgtgcccgctgaatggattcatgag
gccaaagcagtgcgagcacacatggaatccgacaagcacttggaggccctctacttattt
aaagcaggacactggaacaggtgccacaagctcgtcatccggcacttagcttctgatgcc
attattaatgagaactatgactacctgaaggggttcttggaagacctggcacctctggag
cgcagtggcctaatccaggactgggaaacatctgggcttgtttacctggactacattagg
gtcattgaaatgctccgtcatatacagcaggtggattgctcaggttatgaactcgagcag
ttgcacaccaaagtgacctcactgtgcaacaggatagagcaaatccagtgttacaatgcc
aaggaccgcctggctcagtcagacatggccaaacgtgtagccaacctgctgcgggtggta
ctgagccttcagcatgcctctgatacaacctccgactcaacgccagaccctcagcgagtc
cctttgcgcctgttggctccccacattggccggctccccatgcctgaggactatgccttg
gaggaactgcgcagcctcacacagtcctacctgcgggaactgactgtcgggagccagtga
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integrated database retrieval system
