Bos taurus (cow): 540170
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Entry
540170 CDS
T01008
Symbol
PUM2
Name
(RefSeq) pumilio homolog 2 isoform X4
KO
K17943
pumilio RNA-binding family
Organism
bta
Bos taurus (cow)
Pathway
bta05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
540170 (PUM2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Rad26-like_N
PC4
Motif
Other DBs
NCBI-GeneID:
540170
NCBI-ProteinID:
XP_003586699
BGD-bta:
BT12003
Ensembl:
ENSBTAG00000011155
VGNC:
33570
UniProt:
A0A3Q1LXP7
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All DBs
Position
11:78486747..78604377
Genome browser
AA seq
984 aa
AA seq
DB search
MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGTSHHSMSQP
IMVQRRSGQGFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRD
AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGLPNGMDADCKDFNRTPGSRQ
ASPTEVVERLGPNTNPPEGLGPLPNPTSNKPLVEEFSNPETQNLDAMEQVGLDSLQFDYP
GNQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALATAQQPHIAGVFSA
GLAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQ
QAAAAANNTANQQAASQAQPGQQQVLRAGAGQRPLTPNQGQQGQQAESLAAANPTLAFGQ
GLATGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAAAA
AGGTANSLTGSTNGLFRPIGTQPPPQQQQQQQPSTNLQSNSFYGSTSLTNSSQSSSLFSH
GPGQPGSTSLGFGSSSSLGAAIGSALSGFGSSGGLTNGSGRYISAAPGAEAKYRSASGTS
SLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHG
SRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIR
GHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQ
PQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYG
NYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVC
CQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILA
KLEKYYLKNSPDLGPIGGPPNGML
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgattttcaagctcttgcattagaatctcggggaatgggagagcttttgcct
accaaaaaattttgggaacctgatgattcaacaaaagatggacaaaaaggcatatttctt
ggggatgatgaatggagagagactgcatggggaacttctcaccattcaatgtcccagcct
attatggtacagagaagatctggacagggttttcatggaaacagtgaagtaaatgcaata
ttgtctccgcgatcagaaagtggaggccttggtgtgagcatggtagaatatgtattaagt
tcttctcctgctgataaattggattctcgatttaggaagggaacttttggcactagagat
gctgaaacagatggacctgagaaaggagatcaaaaaggcaaggcttctccatttgaggag
gaccaaaacagagatcttaagcaaggagatgatgatgattctaaaataaatggcagaggt
ttgccaaatggaatggatgccgattgcaaagattttaatcgtactcctggaagtcgtcaa
gcctctccaactgaagtagttgagcgcctgggccccaatactaatcccccagaaggactg
gggcctcttcctaatcctacatctaataaaccacttgttgaagaattttcaaatcctgaa
actcagaatctggatgccatggaacaagttggtctggattccttacagtttgactatcct
ggtaatcaggtaccaatggactcttcaggagctactgtaggcctttttgactacaattcc
cagcagcagctttttcagaggactaatgcactaacagttcagcagttaactgcagctcag
cagcagcagtatgcattagccacagctcagcagccacatatagctggtgtattttcagca
ggccttgctccagctgcatttgtgccaaatccatatattattagtgctgctcctccaggg
actgatccgtatactgcagcaggattggctgcagcagctacattagcaggtccggcagtg
gttccacctcagtattatggtgttccgtggggggtgtatccagccaatttatttcagcag
caagctgcagctgcggcaaacaacaccgcaaatcaacaagcagcatcacaagctcagcct
ggacagcaacaggttctccgtgctggggcaggtcagcgccctcttactcccaatcagggc
cagcaagggcagcaagctgaatcacttgcagcagcaaatccaactttggcttttggtcag
ggtcttgctaccggcatgccaggctatcaagtactagctccaactgcctattatgatcag
accggtgccttagtggttggccctggggcaagaactggccttggagctccagttcgatta
atggctccaacacctgttttaattagttcagcagcagcacaagctgcagcggcagcagca
gctggaggaactgcaaatagtctcacaggcagcacaaatggtctgttccggccaattggc
actcagccaccaccgcagcagcagcagcagcagcagccaagcactaatctgcagtctaat
tcattttatgggagcacttctctgactaatagctcccagagcagttctttattttctcac
ggacctggccagcctggaagtacatctcttggctttggaagcagtagctctttgggtgct
gctataggctcagccctcagtggatttggttcatcaggaggactgacaaatggtagtggt
cgatatatctctgcagcacctggagcagaagcaaaataccgaagtgcttcaggcacttcc
agtctatttagctccagcagccagctctttcctccttctcggcttcggtataataggtct
gatattatgccttctggccgaagtagattattagaagatttcagaaacaaccgcttccca
aaccttcaacttagagacttgattggacacatagttgagttttctcaagaccagcatggt
tctagattcatacagcaaaagctagagagagctactccagctgagcgacagatggttttt
aatgaaattctacaagcagcctatcaattaatgacagatgtttttggcaactatgtcata
cagaaattttttgagtttgggagtttggatcaaaaattagccctagctactcgtattcga
ggtcatgttctacccttagcattgcagatgtatggctgccgtgttattcagaaagcatta
gagtctatttcatctgaccagcagagtgaaatggtaaaggagctcgatggtcatgtactc
aaatgtgtgaaagatcaaaatggaaaccatgttgtacaaaagtgtattgaatgtgttcag
ccacagtcactacagttcatcattgatgctttcaaaggacaagtatttgtactttcaact
catccttatggctgcagagtaatccagcgcattctggagcattgcactgcagagcagacc
ttacctatcttagaagaactccaccaacatacggagcagttggtacaggatcagtatggc
aattacgttattcagcatgtactggaacatggtcgacctgaagacaagagcaaaattgtt
tctgaaatccgaggaaaggtcttagccttgagtcaacacaaatttgccagcaatgtagta
gaaaagtgtgttactcatgcctcccgtgctgagagagctttactgattgacgaagtttgc
tgccagaatgatggtcctcacagtgccttatacaccatgatgaaggaccagtatgccaat
tatgtcgttcagaagatgattgatatggctgaacctgctcagagaaagataatcatgcac
aagattcgacctcacatttctactttacgcaaatatacatatgggaagcatatactggcc
aagttggaaaaatattatttgaaaaatagcccagatctagggcctattggaggaccacca
aatggaatgctgtaa
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