KEGG   Bos taurus (cow): 540428
Entry
540428            CDS       T01008                                 
Symbol
POLR2J
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
bta  Bos taurus (cow)
Pathway
bta03020  RNA polymerase
bta03420  Nucleotide excision repair
bta05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    540428 (POLR2J)
  09124 Replication and repair
   03420 Nucleotide excision repair
    540428 (POLR2J)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    540428 (POLR2J)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bta03021]
    540428 (POLR2J)
   03400 DNA repair and recombination proteins [BR:bta03400]
    540428 (POLR2J)
Transcription machinery [BR:bta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     540428 (POLR2J)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      540428 (POLR2J)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 540428
NCBI-ProteinID: NP_001032560
BGD-bta: BT28884
Ensembl: ENSBTAG00000005446
UniProt: Q32P79
Structure
LinkDB
Position
25:34576781..34581157
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgcccctcccgccttcgagtcgttcttgctcttcgagggcgagaagaagatcacc
attaacaaggacaccaaagtacccaatgcctgtttgttcaccatcaacaaggaggaccac
acgctaggaaacatcattaaatcgcagctcctaaaggacccacaggtgctgtttgctggc
tacaaagtcccgcaccccttggagcacaagatcatcatccgggtgcagaccacgccggac
tacagcccccaggaggccttcaccaacgccatcaccgaccttatcagcgagctgtccctg
ctggaagagcgcttccgggtggccatcaaagacaagcaggaaggcatcgagtag

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