Bos taurus (cow): 540947
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Entry
540947 CDS
T01008
Symbol
SS18
Name
(RefSeq) protein SSXT
KO
K15623
protein SSXT
Organism
bta
Bos taurus (cow)
Pathway
bta03082
ATP-dependent chromatin remodeling
bta05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
540947 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
540947 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
540947 (SS18)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
540947 (SS18)
GBAF(ncBAF) complex
540947 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
540947
NCBI-ProteinID:
NP_001091591
BGD-bta:
BT12318
Ensembl:
ENSBTAG00000011531
VGNC:
35305
UniProt:
A5D7A1
LinkDB
All DBs
Position
24:30669797..30746233
Genome browser
AA seq
386 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMSPSGPPPPPRAHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHIPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMSMQPNQGPVMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMSQVNQ
GNHMLGQRQIPPYRPPQQGPPQQYSGQEDYYGEQYSHGGQGPPEGMNQQYYPDGNSQYGQ
QQDAYQGPPPQQGYPPQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRP
AQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggcgttcgcggccccgaggcagcgcggcaagggggagatcactcccgccgcg
attcagaagatgctggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacctcagagtgttctcagtatcaacagatgttgcataccaacttggtctac
cttgctacaatagcagattctaatcagaacatgcagtctctcttaccagcaccacccaca
cagaatatgcctatgggtcccggagggatgagtccgagcggccctcccccacctccgcgc
gctcacaacatgccttcagatggaatggtaggtgggggtcctccggcaccacacatgcag
aaccagatgaacggccagatgcctgggcccaaccatatccctatgcagggacctggaccc
aatcaacttaatatgacaaacagttccatgaacatgccttcaagtagccacgggtccatg
ggaggttacaaccattccgtgccatcatcccagagcatgccggtacagaaccagatgacc
atgagtcaaggacagcccatgggaaactacggccccagaccaaatatgagtatgcagcca
aaccaaggtccagtgatgcaccagcagcctccttctcaacagtacaacatgccccaggga
ggtgggcagcattaccaaggccagcagccaccaatgggaatgatgagtcaagttaaccaa
ggcaatcatatgctgggtcagaggcagatccctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaacaatacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcagtattaccctgatggaaattcgcagtatggccaa
cagcaagatgcctaccaaggaccacctccccagcagggctacccaccccagcagcagtac
ccagggcagcaaggctacccaggacagcagcagggctacggtccttcacagggtggccca
ggtcctcagtatcctaactacccacagggacaaggtcagcagtacgggggttacagaccg
gcacagcctggacccccacagccaccacagcagaggccttatgggtacgaccaggggcag
tatggaaactaccagcaatga
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