Bos taurus (cow): 541083
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Entry
541083 CDS
T01008
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
bta
Bos taurus (cow)
Pathway
bta03015
mRNA surveillance pathway
bta05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
541083 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
541083 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
541083 (HBS1L)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
541083 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
541083
NCBI-ProteinID:
NP_001039963
BGD-bta:
BT16271
Ensembl:
ENSBTAG00000020174
VGNC:
29768
UniProt:
Q2KHZ2
LinkDB
All DBs
Position
9:complement(73010902..73096052)
Genome browser
AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPSAVEPVEEYDYE
DLKEFSSSFVNHQLSGIDQARLYSCLDHMREVLGDAVPDDILIEAVLKNKFDVQKALSVV
LEQDKVQNLKVRSEGAISTGKIAKGKSIDSQSSQSESEIVPKVTKMTVSGKKQTMGFEVP
RVTAEENGHSFHTPQKGHSSEDTSLVSSDALESASKSALPSHTIQASEEQSSTPTPVKKS
GKLRQQIDIKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCVPKEPIKVCTRFRARILIFNIEIPITKGF
PVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggttataactacgatgaagattttgaagatgatgac
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcacgacgtgacaaaccttcagctgttgaacctgtagaagaatatgattatgaa
gatttgaaagaattctccagttcttttgtgaatcatcagctaagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtacttggagatgctgtgccagatgac
atattgattgaagcagttctgaagaacaagtttgatgtgcagaaggctttgtcagtggtt
ctggagcaagataaagtgcagaatttgaaagtcaggagtgagggagcaatatctacagga
aagatagcaaaaggaaaatcaatagattcccagtcatctcaaagtgaatctgaaattgtg
ccaaaagttactaagatgactgtatctggaaagaagcaaactatgggatttgaagtgccc
agagtaactgctgaagaaaatggtcatagtttccatacacctcaaaaaggacattctagt
gaagataccagccttgtttcttctgatgcacttgagagtgcttctaaatcagctcttcca
tcccacaccattcaagcatcagaagagcagagttcaacaccaacaccagtgaaaaagtct
ggcaagctgaggcaacaaatagatattaaagcggaactggagaagcggcaaggaggaaag
cagctcctcaacctagtggtcattggtcatgttgatgctgggaaaagtactctgatggga
catttgctttatcttctgggtgatgtaaacaaaagaactatgcataagtatgaacaagag
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaa
gaaagggaaaggggggtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
gttattacattaatggatgctccaggccataaggatttcattccaaatatgattacagga
gcagcccaggcagatgtagctgttttagttgtagatgccagcaggggagagtttgaagct
ggatttgagactgggggacaaacacgagagcatggactcttggttcgttctcttggagtg
acccaactcgcagttgcagtcaataagatggatcaggttaattggcaacaagaaaggttt
caagagattactggaaaacttgggcactttcttaagcaagcaggttttaaggaaagtgat
gtagcttttatcccaacaagtggtctcagtggtgaaaatctaatcacaagatctcaatca
agtgaactaacaaaatggtataaaggactatgtttattagaacaaattgactccttcaag
cctcctcaaagatctatagataagccttttagactatgtgtatctgatgttttcaaagat
caaggatctggattttgtgtaactggtaaaattgaagctggttatatccaaactggtgac
cgactcctagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgat
gaacctgtcgactgggcggcagcaggagatcatgttagtcttacattggttggaatggat
atcatcaaaatcaatgttggctgcatattttgtgtccccaaagaacccattaaggtttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctatcactaaaggattt
cccgtgctgttacactaccaaaccgtcagtgaacccgctgttattaaaagattgattagt
gttttaaacaaaagcactggtgaagtcacaaagaaaaagcctaaattgttgaccaaaggc
cagaatgcattagtggagctacagacacaaagaccagtggctcttgagctctacaaagac
tttaaagagctggggaggtttatgctgcgctacagtggttctaccatagctgctggtgta
gtgactgagataaaagattga
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