KEGG   Bos taurus (cow): 613347
Entry
613347            CDS       T01008                                 
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
  KO
K24355  collagen type XXIII alpha
Organism
bta  Bos taurus (cow)
Pathway
bta04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:bta00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    613347 (COL23A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:bta00536]
    613347 (COL23A1)
Glycosaminoglycan binding proteins [BR:bta00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   613347 (COL23A1)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 613347
NCBI-ProteinID: XP_002689082
BGD-bta: BT29543
VGNC: 54416
LinkDB
Position
7:complement(39317415..39720915)
AA seq 518 aa
MLDERAMSPGRRAYEDKRNGDAAGGGGGPVSPATGARAWAVSALCLLLSASSAVACLLLA
VQAAALQGRVAALEEERELLLRAGTPDALAAWAEPRLERLLREKLEGPVKIRTVREAPTD
CVCPPGPPGRRGKPGRRGDPGPPGQSGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPQG
DPGQDGAAGPPGPPGPPGARGPPGDTGKDGPRGAPGPEGPKGEAGQDGATGPSGPPGPKG
DDGIPGQPGLSGPPGPKGEPGHPGTDGATGQRGPPGLKGEQGDTVVIDYDGRILDALKGP
PGPQGPPGPPGIPGAKGELGLPGAPGIDGEKGPKGQKGDPGEAGPTGPKGEAGEMGLSGL
PGANGPKGEKGESASDKLQESLAQIIAEPGPPGPPGPPGPMGLQGMQGPKGLDGAKGEKG
SSGERGPTGLPGPAGPPGLIGLPGTKGEKGRPGEPGLDGFPGPRGEKGDRSERGEKGDRG
VPGRKGMKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHK
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgctcgacgagcgcgccatgagtccaggccggcgcgcctacgaggacaagcggaacgga
gacgcagctggcggcggcggcggacccgtgagccccgcgactggagcgcgggcctgggcg
gtgagcgcgctgtgcctgctgctctccgcgagctcggcggtcgcctgcctgctgctggcc
gtccaggcggccgcgctacagggccgggtggcggccctcgaggaagagcgggagctgctg
ttgcgcgcggggactcccgacgccttggccgcctgggccgagccgcggctggagcgcctg
ctgcgtgagaagttggagggaccagtcaagatccggacagttcgagaagcaccgacagac
tgtgtctgccccccaggcccccctggacggcgtggcaagcccggaagaagaggtgatccc
ggtcctcctgggcaatcgggacgagatggctacccggggccactgggtctggatggaaag
cctggacttccgggccccaaaggggaaaagggcgcaccaggagactttggcccccaggga
gatccagggcaagatggagctgctgggcctccagggcctccaggaccccctggggcccgg
ggccctcctggcgacactgggaaagatggccccaggggagcaccaggcccagagggtccc
aaaggagaagctggacaagatggtgcaacgggcccgagtggacccccaggccccaagggg
gatgacgggataccaggccaaccagggctctctggacccccagggcccaagggggagccc
ggccacccaggcactgatggagccacggggcagcggggtcccccgggcctcaagggcgaa
caaggagacacagtggtaattgactacgatggcaggatcttggacgcccttaagggtcct
cctgggccacaggggcccccagggccaccagggatccccggagccaagggcgaactcgga
ttgcctggtgctcctggaatcgacggagagaagggtcccaaaggacagaaaggagaccca
ggagaagccggaccaacaggacccaaaggggaagcaggagaaatgggcttgtcaggcctc
ccgggtgccaacggccccaagggagagaagggagagtctgcatctgacaagctacaggag
agcctggcccagatcatagcagagccagggcccccaggccctcctggtcccccaggcccc
atgggccttcaggggatgcagggtcccaagggcttggatggagcaaagggagagaagggc
tcgtcgggtgagagaggacccaccggcctgcctgggccagctggcccaccaggccttatt
gggctgccaggaaccaaaggagagaagggcagacccggggagccaggactagatggtttc
cctggacctcgaggagaaaaaggagaccggagcgagcgtggagagaagggggatcgcggt
gtcccgggtcggaaaggaatgaaaggccagaagggcgagccgggacccccaggcctggac
cagccgtgtcctgtgggccccgatggactgcctgtgcctggctgctggcataagtga

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