KEGG   Bos taurus (cow): 613630
Entry
613630            CDS       T01008                                 
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
bta  Bos taurus (cow)
Pathway
bta03018  RNA degradation
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    613630 (LSM8)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    613630 (LSM8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    613630 (LSM8)
   03041 Spliceosome [BR:bta03041]
    613630 (LSM8)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     613630 (LSM8)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     613630 (LSM8)
Spliceosome [BR:bta03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    613630 (LSM8)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 613630
NCBI-ProteinID: NP_001029912
Ensembl: ENSBTAG00000012649
VGNC: 31060
UniProt: Q3ZCE0
LinkDB
Position
4:82786342..82807241
AA seq 96 aa
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacgtccgccttggagaactacatcaaccgaactgttgctgtcattacttctgatggg
agaatgattgtgggaacactgaaaggttttgaccagaccattaatttgatactggatgaa
agccatgaacgagtgttcagctcttcacagggagtagaacaagtggtactagggttatac
atcgtaagaggcgacaatgttgcagtcattggagaaattgatgaagagacagattctgca
cttgatttggggaatattcgagcagaacctttgaactctgtagcacactga

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