KEGG   Bos taurus (cow): 613634
Entry
613634            CDS       T01008                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bta  Bos taurus (cow)
Pathway
bta03018  RNA degradation
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    613634 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    613634 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    613634 (LSM4)
   03041 Spliceosome [BR:bta03041]
    613634 (LSM4)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     613634 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     613634 (LSM4)
Spliceosome [BR:bta03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    613634 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 613634
NCBI-ProteinID: NP_001030513
BGD-bta: BT16889
Ensembl: ENSBTAG00000008578
VGNC: 31056
UniProt: Q3ZBK6
LinkDB
Position
7:4881009..4893677
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcgctgctgaaaacggctcagaatcacccaatgttggtggagctcaaa
aacggggagacatacaacgggcacctggtgagctgcgacaactggatgaacatcaacctg
cgcgaggtgatctgcacgtccagggacggggacaaattctggcggatgcctgagtgctac
attcgcggcagcaccattaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgtggccgcggtggcctgcagcagcagaagcagcagaag
ggccgagggatggggggcgccgggcgaggtgtgttcggtggccggggccgaggtgggatc
cccgggactggcagaggtcaaccagaaaagaagccaggccgacaggcgggcaagcagtga

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