KEGG   Bos taurus (cow): 615136
Entry
615136            CDS       T01008                                 
Symbol
LSM5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
bta  Bos taurus (cow)
Pathway
bta03018  RNA degradation
bta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    615136 (LSM5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    615136 (LSM5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bta03019]
    615136 (LSM5)
   03041 Spliceosome [BR:bta03041]
    615136 (LSM5)
Messenger RNA biogenesis [BR:bta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     615136 (LSM5)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     615136 (LSM5)
Spliceosome [BR:bta03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    615136 (LSM5)
SSDB
Motif
Pfam: LSM SM-ATX LSM12_LSM LSM14
Other DBs
NCBI-GeneID: 615136
NCBI-ProteinID: NP_001040018
BGD-bta: BT15272
Ensembl: ENSBTAG00000002332
VGNC: 31057
UniProt: Q2HJH0
LinkDB
Position
4
AA seq 91 aa
MAANATTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcggctaacgctaccactaacccgtcgcagctgcttcctctagagcttgtggacaag
tgtatagggtcaagaattcacattgtgatgaagagtgataaggagattgttggcacactt
ctgggatttgatgactttgtcaatatggtattggaagatgtcactgaatttgaaatcaca
ccagaaggaagaagaattactaaattagatcaaattttgctaaatggaaataatataaca
atgctggttcctggaggagaaggacctgaagtatga

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