Bos taurus (cow): 615138
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Entry
615138 CDS
T01008
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X2
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
615138 (TDRD12)
Enzymes [BR:
bta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
615138 (TDRD12)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Gene silencing
piRNA pathway
615138 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Gal-bind_lectin
Ribosomal_S17
Motif
Other DBs
NCBI-GeneID:
615138
NCBI-ProteinID:
XP_024834801
BGD-bta:
BT22095
VGNC:
35717
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All DBs
Position
18:43188254..43263974
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AA seq
1300 aa
AA seq
DB search
MLQVLVLKIEDPGCFWVVIKGCSPFLDHEVDYQKLNSAMNDFYNSLCQDIEIKPLKLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFARYIPVKSRNIRVAIETFMQLPY
RAKKFRLYCTKPVTLHINFCEDSAEIVRAKKWDSAAIQYFQNILKATTQVEAKLCAVEED
TFEVYLYVTLKNEKVCVNDDLVAKNFACYVSPMENKNFDSLEKPRLNIKSASFSSKLNPA
LTLWPMFLQGKDSQRMETKSLKHPWPQGAGDFRPTSRLLEKTVKCNMDSLKGSPKKESEK
KQQYISLKDVNKCVESSVCWPTKRGITIYANPDTPAASASCQKSSEKPLRSAEKKEYNEK
NGCVKLLQFLNPDPLRADGISDLQQLQKLKSGSRQPMAVLRNKIEPCLSIETAPLSTDLK
KALQRNKFPGPSHTESYSWPPIARGCDVVVISHCGNDPSLYLPPVLTILQTGGCYKSLPS
RNGPLAVIVCPGWKKAQFIFELLGDYSASCRPLHPVLLTIGLHKDEAKNMKLPRGCNVVV
TTPHSLLRLLQYQSLLFLRLCHLLLDEVEVLLSEANEQMFAILDNFKKHMEVEERESAPH
QIVAVGVHWNRHIEHLIKEFMNDPYIVITAMEEAALYGCVQQVVHLCLECEKTSTLLQTL
DFTPSQAQKTLIFTCSAAETETVCKVVESNSIFCLKMHKEMIFNLKSVSQQWKKKLSSGS
HIVLALTDDCIPLLAITDATCIIHFSFPSSPKVFGGRLYCMSDHFQSLTEQGSAEQGDKK
TKSVLLLSERNACHAVGVLRYLERADAKIPSELYEFTAGVLEAKEDGKVRRPLCPYLKAF
GFCKDRRICPDRHRVNPEVDIPRKLSSQTLPVLGYIKIIPFYVLNATNYFGRIVDKHEDL
CATLNAEMKEYFEDSSNKATVEKIEKFGLYGLAEKSVFHRVQVLEMRQKEDTWALDHVLV
KFIDEGRTGLVTRDQLLHLPESFHTLPPQAVEFIVCRVKPADNEIEWNPKVTRYIHHKII
GKLHDAKVILALGDTVWIDPMVHITKLSNLKTSVIDYNVRAEILSMGMGIDNSEHVEQLK
KLYKGAKMPSFEESLNQTLVPSSREDSACLPSTQQEDKGSERGTDTKTNSENQKHETLPK
NTGGASINKTAEPPKSFHPQIKWFQKEDVVILKIKIRNVKDYKCKYFRDRVVFSAWVGEK
FYLADLELQANIIKDDCKCIIKYDEPVITLVKEQRESWCGLLKQRNPNVAFDFDHWEDCD
EDKEDSHFAKVVNSKNLSCNVAGLVETSDKSSDEDESESE
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggtcctcgtgcttaagattgaagatccaggttgcttctgggttgttataaaa
gggtgtagtccctttttagatcatgaagttgactatcaaaaactaaatagtgccatgaat
gacttctataacagcctgtgtcaagatatagaaataaaaccactgaagttggaagaaggg
caggtttgtgtggtttattgtcaggaactaaagtgctggtgcagggcagttattaagtca
atcgtgtcttcagcagaccattacctcgcagagtgtttccttgtggattttgccagatac
attccagtgaaatccagaaacatccgagttgccatagaaacttttatgcagcttccctac
agagcaaaaaaattcagactgtactgcacaaaacctgtcacattgcacattaacttctgt
gaagacagtgctgaaattgtacgggccaagaagtgggacagtgcagctattcagtacttc
cagaacatcctgaaagcgactacccaggtagaagccaaattgtgtgctgtggaagaagat
acttttgaggtttacctttatgtaactctgaaaaatgaaaaggtttgtgttaacgatgat
ctggttgcaaagaacttcgcttgttatgtgtcacccatggagaataaaaactttgattct
ttggagaagccaagattgaatataaagtcagcatccttttccagtaagctcaatccagca
cttactctttggccaatgtttttgcaaggaaaggattctcaaaggatggaaacaaagtct
ctcaagcatccgtggccccagggtgcaggtgacttcaggccaaccagtaggctcctggag
aagactgtaaaatgtaatatggattcattgaaaggttcacctaaaaaagaatctgaaaag
aaacaacagtacatctccttgaaagatgtaaataagtgtgttgaatcttcagtgtgctgg
ccaacaaagagaggcataaccatatatgccaatccagacacaccagctgcaagtgcttca
tgtcagaagtcaagtgagaagccacttagatcagctgagaagaaagaatacaatgagaag
aatggctgtgtgaaattactgcagtttttaaatcctgatcctttgagagctgatggaatc
tctgatttacagcagttgcagaagctgaagtcggggtcccggcagcccatggcagttttg
cgaaacaagattgagccctgcttgtccatcgagacagcaccactctcaacagacctgaaa
aaggctcttcagagaaataagtttccaggccccagccacactgagtcttactcctggcct
cccatagcgcggggctgcgacgtggtggtcatttctcactgcggaaatgacccttcgttg
tacctcccaccagtgctcacgattctgcaaaccgggggctgctacaagtcgttgccaagt
aggaacggacctctggcagtcatcgtgtgccctgggtggaaaaaggcccaatttattttt
gaattattgggagactatagcgcgtcctgcagacctcttcatcctgtgttgttaacaatc
ggactgcacaaagatgaagccaaaaatatgaagcttccaaggggatgcaatgtggttgtc
acaacaccacatagtctcctgagacttctccagtatcaaagcttattgtttcttagactc
tgtcacctacttttggatgaggtggaagtgttactgtctgaggctaatgagcaaatgttt
gctatattagataactttaaaaaacacatggaagttgaagaaagggaatctgccccacat
cagattgttgcagttggagttcactggaacagacatatagagcatttaatcaaagagttc
atgaacgacccctacattgtgatcacggccatggaagaggctgccctctatggctgcgtc
caacaggtcgtacatctttgcttggaatgtgaaaaaacttctactttactccagactctt
gacttcaccccaagccaggcacagaagaccttgatcttcacctgttccgcagctgagaca
gaaacagtgtgtaaggtggtagaaagcaattccatattttgcttgaaaatgcataaagaa
atgatttttaatttaaaaagtgtttcacaacaatggaagaagaagttaagttctggttct
cacattgtattagccctcacagatgactgcatcccactcctggccatcaccgacgccacg
tgtatcattcacttcagttttccttcctctccaaaagtcttcggtggacgcctatattgc
atgtccgatcattttcagagtttaactgaacagggttctgcagaacagggagataaaaag
accaaatctgtcttgctgctgtcggagagaaatgcctgccacgcagttggtgtcctgcgc
tacttggagcgagcagatgccaagatcccgtcagagctgtacgagtttacggcgggggtt
ctggaagccaaagaagatggaaaagtcagaaggcctctttgtccgtatcttaaggctttt
ggtttttgcaaagacagaaggatctgtcctgaccggcaccgtgttaatccagaagtagac
ataccaaggaagttatccagccaaactctaccggtgcttggatacataaaaataataccc
ttttatgttttgaatgcaacaaattactttggtcgtatagttgataaacatgaggatctt
tgtgcaactcttaatgctgagatgaaagagtattttgaagactccagtaataaagcaact
gttgaaaagatagagaaatttggattatatgggttagcagaaaaatcagtttttcacagg
gttcaggtgttggagatgcgccagaaggaggacacgtgggccctggatcatgtccttgtg
aaattcatagatgaaggcaggactggactcgtcacaagagaccagttgctgcacctccca
gagagtttccacacactgcccccgcaagctgtggagtttatcgtttgtagagtgaaaccc
gcggacaatgaaattgaatggaatccaaaggttactaggtacattcatcataaaatcatt
ggaaaactgcatgatgcaaaagtgatactggctttaggagatacagtttggattgatcca
atggtgcacattacaaaactttcaaacttgaaaacttctgtcattgattataatgttcga
gctgaaattttgtcaatgggaatgggcattgataactcagaacatgtagaacaactgaaa
aaattatacaaaggagctaaaatgccatcttttgaagaaagcctgaaccagaccctggta
ccttcttccagagaagacagtgcttgtctgccgagcacacagcaagaggacaagggctca
gagagaggaactgacaccaagacaaactcagaaaaccaaaagcatgaaactttacctaaa
aacactggaggtgcttccattaacaaaactgcagagccgccgaaaagcttccacccacaa
ataaaatggttccaaaaagaggatgtggtcatactgaagataaaaataaggaacgtaaaa
gattataaatgtaaatactttagagatagagttgttttcagtgcctgggtaggagagaaa
ttttacttggctgatttggagctacaagccaacataataaaagatgattgcaaatgcata
attaaatatgacgaacctgtaatcactcttgtaaaagagcaaagggagtcttggtgtggc
ttactcaaacagaggaatcccaatgtggcttttgattttgatcactgggaagactgtgat
gaggataaggaggatagccactttgccaaagttgtaaactctaaaaacctgtcctgcaat
gtggcaggcttggttgagaccagtgacaaaagttcggatgaagatgaaagtgagagtgaa
tga
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