Bos taurus (cow): 615657
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Entry
615657 CDS
T01008
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
bta
Bos taurus (cow)
Pathway
bta04136
Autophagy - other
bta04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
615657 (ATG4D)
04136 Autophagy - other
615657 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bta01002
]
615657 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
615657 (ATG4D)
03029 Mitochondrial biogenesis [BR:
bta03029
]
615657 (ATG4D)
Peptidases and inhibitors [BR:
bta01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
615657 (ATG4D)
Membrane trafficking [BR:
bta04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
615657 (ATG4D)
Mitochondrial biogenesis [BR:
bta03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
615657 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
615657
NCBI-ProteinID:
NP_001092616
BGD-bta:
BT22830
Ensembl:
ENSBTAG00000010727
VGNC:
26260
UniProt:
A5PK87
LinkDB
All DBs
Position
7:15053168..15061658
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AA seq
472 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRTPDPHGLGPSGASGPALASPGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGSLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWCQGAGLGPSEPPG
LGSPSRRRGPARWLPPRWAQAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQGSGKK
AGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVI
LVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQP
TVDVSQADFPLESFHCTSPRRMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSAT
ERYPMFTLVEGHAQDHSLDDLCSPPSQQTLRLPRSGRLLKAKRPSSEDFVFL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgccgctcagtaccggagcgggagtccggaggacgcgcgc
cgcccggagggccgcaggccgcggggaccccgaaccccggacccccacggcctggggccc
tccggagctagcggccccgctcttgcatcgcccgggaccggccccggagagccggacgaa
gtggacaagtttaaggcgaagttcctgaccgcttggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctccagtgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggactttgtatctcgcctatgg
ctcacataccgccgggacttcccaccccttgcgggaggcagcctgacctcagactgtggc
tgggggtgcatgttacgaagtgggcagatgatgctggctcagggccttctgcttcatttc
ctgcccagagactggacgtggtgccagggcgcaggcctgggcccctccgagccgccgggg
ttgggctctcccagccgacgccgggggcctgcgcggtggctgcctccgcgctgggcccag
gcccctgagctggagcaggagcgccggcatcggcagatcgtgtcctggttcgctgaccac
ccccgggccccctttggcctacaccggctggtggagctggggcagggctcaggcaagaag
gcaggcgactggtatgggccgtctctggtggcacacatactcaggaaagcggtggagagc
tgctcagaggtcacccgcctggtggtgtacgtctctcaggactgcacagtatacaaagcg
gacgtggcacgcctggtggcccggccagaccccacggctgaatggaagtccgtggtcatc
ctggtaccagtgcggcttggtggagaaactctcaaccccgtgtacgtgccctgcgtgaag
gagctccttcgttcagagctgtgcctgggcattatgggcggcaagccccgccactcgctg
tacttcatcggctaccaggatgacttcctgctctacctggacccgcactactgccagccc
accgtggatgtcagccaggccgacttccccctggagtccttccactgcacctcaccccgc
aggatggcctttgccaagatggacccaagctgtaccgtgggtttctatgctggagacaga
aaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagccaca
gaacgataccccatgttcaccctggtcgagggccacgctcaggaccacagcctggatgac
ctctgctccccgccctcccagcaaacactgcggctccctcgcagtggccggctcctcaag
gctaaacgcccaagctctgaggactttgtgtttttataa
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