Bos taurus (cow): 616566
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Entry
616566 CDS
T01008
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
bta
Bos taurus (cow)
Pathway
bta04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
616566 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bta04131
]
616566 (SCARF1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bta04990
]
616566 (SCARF1)
Membrane trafficking [BR:
bta04131
]
Endocytosis
Phagocytosis
Scavenger receptors
616566 (SCARF1)
Domain-containing proteins not elsewhere classified [BR:
bta04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
616566 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
EGF_2
Motif
Other DBs
NCBI-GeneID:
616566
NCBI-ProteinID:
XP_002695728
Ensembl:
ENSBTAG00000011483
VGNC:
34326
UniProt:
F1ML32
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Position
19:complement(22738474..22748948)
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AA seq
830 aa
AA seq
DB search
MGPGLLFPLLLLEALGAPGSELDAGGRHVCKASSPSAELQCCPGWRRKDRECTIPICEGL
DACREDEVCVKPGLCRCKPGFFGAQCNSRCPGQYWGPDCREVCACHPHGQCEPATGVCHC
QPDRWGDRCEFPCACGPHGRCNPETGACRCEPGWWSPTCRRPCQCNPAAARCDQATGSCL
CEPGWWGRRCSFRCACHGSPCAQESGRCACRPGWWGPECRQPCECVRGRCSAVSGQCSCP
PGFQGVRCELPCPAGQYGLRCRDSCGHCKQNKPCSADTGSCEACKPGWNGTQCHQPCPPG
TFGENCSQQCPHCRLGEACQPDTGHCQRCEPGWRGPRCEDPCLIGTFGEGCGSTCPTCVQ
GACDAVTGECVCNAGYWGPSCNTSCPSGFHGNNCSVPCECPEGNCDPVSGACQLGSHSQD
AALIAGILVPLLLLLLAIACCACCCWAARLDPKDRPVRDGTAMSRMKLRVWGALTSSLGS
ALPCGPLSSHKLPWVTVSHHDPEIPFNHSFIEPPSAGWASDDSFSSDSESGEEDEGPAYC
VPPQEGMVPAVPAESSEASLAGGPFPPPEDASTPFAIPRTSSLARAKRPSVSFAEGTKFA
PQSRRGSGELSSPLRKPKRLSRGTQPGPESQETEESTGPQVETDGAPPGTASPRDSAVGR
RRLPLGGRTVAERVEAIEGSVQESSGSVTTIYMLAGTPRGPEGPVRSVLRRFGSFQKGQA
EPKVKSAIPKPPRRALSRNKDSPRLDSGSANQSPSSAMKEELTGALESSGTGSEEGARSL
GGSIKSSEGGQELAPEDGSLVQDPQKVADKEGQEEPQYENVVPISGPLEP
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggggccggggctgctgttccctctattgctgctcgaggctctgggggccccagggtct
gagctggacgccggggggcggcacgtctgcaaggccagcagtccctctgctgagctccag
tgctgcccaggctggaggcggaaagatcgagaatgcaccatccccatctgcgaggggctg
gatgcctgccgggaagacgaggtatgtgtgaaaccaggcctctgtcggtgcaaacctgga
ttcttcggagcccagtgcaactcccgctgcccgggccagtactggggccccgactgcagg
gaggtctgcgcctgccacccgcacggccagtgcgaaccggccaccggcgtgtgccactgc
caacctgaccgctggggcgaccgctgcgagtttccgtgcgcctgcggtccccacggccgc
tgcaaccccgagaccggcgcatgccgctgcgagcccggctggtggtcgcccacgtgccgc
cgcccgtgccagtgcaaccccgcggcggcgcggtgcgatcaggccaccggctcctgcctg
tgcgagccaggctggtggggccgccgctgcagcttccgctgcgcctgccacggctcgccg
tgcgcgcaggagtcgggccgctgcgcctgccggccgggctggtggggccccgagtgccga
cagccgtgcgagtgcgtgcgcggccgctgcagcgccgtctccggccagtgctcctgcccg
cccggcttccaaggcgtgcgttgcgagctgccctgccccgccggccagtacgggctccgg
tgccgcgacagctgtggccactgcaagcagaataagccgtgctctgcagacacaggcagc
tgcgaggcctgcaagccgggctggaacgggacccagtgccatcagccctgccctcctggc
acctttggcgagaactgtagccagcagtgcccccactgccggcttggagaggcctgtcag
ccagacaccggtcactgtcagcgctgtgagcctggctggcgggggcccaggtgtgaagac
ccctgcctgattggcacctttggggagggttgcggctctacctgccccacctgtgtccag
ggggcttgtgatgctgtgacaggggagtgtgtctgcaacgctggctactgggggcccagc
tgcaatacttcgtgtccatctggcttccatggaaacaactgctctgttccctgcgaatgt
ccagagggaaactgcgaccctgtctctggggcctgccagctgggatcgcatagtcaggac
gctgccctcattgcgggcatcctcgttcctctgctgctgctgctcctggccatcgcctgc
tgtgcctgctgctgctgggctgcccggctggaccccaaggacaggccggtgagagatgga
accgccatgtccaggatgaagctgcgggtctggggggccctgacctccagcctgggctct
gcactgccctgtggtcccctgagcagccacaagcttccctgggtgacagtctcccaccac
gacccggagatccccttcaaccacagcttcatcgagccgccctccgctggctgggcttcg
gacgactccttctcttcggattccgagtctggagaagaggatgagggtcctgcctattgc
gtgccaccccaagaagggatggtccctgcggtcccagcggaatcctcagaggccagcctg
gctggaggtcccttccctccccctgaggatgcctccacgccgtttgccatcccgcgcact
tccagcctcgctagggccaagcggccatcagtctcctttgctgaaggcaccaagttcgca
ccacagagtcgccgaggctccggggagctgtccagccctctccgaaagcccaagaggctc
tcccgggggacccagccaggtcctgaaagccaggagactgaggagtccacaggccctcaa
gtggaaacagatggggcccctcctggtactgccagccccagggattcagctgttggtcgc
cgccggctcccacttggtggccggacagtggctgagcgtgtggaagccatcgagggcagt
gtccaggaaagctcaggctctgtcaccacgatctacatgttggcagggacaccccgggga
cctgagggccccgtccggtctgtcctccgccgttttggtagcttccagaaaggccaggca
gaacccaaggtcaagagtgccattcctaagcctccacgtcgggcactgagtcggaacaag
gacagccccaggctagactctggctctgccaatcagagccccagctcagccatgaaggag
gagctgactggggccttggagtcttcagggactgggtcagaggaaggggccaggagcctg
gggggcagcatcaagagctcagagggtggccaggagctggcccctgaggatggctcccta
gtacaggatccccagaaggtggctgacaaggaagggcaggaagagccccagtatgaaaat
gtcgtacccatctctgggccactggaaccctga
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