Bos taurus (cow): 616685
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Entry
616685 CDS
T01008
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bta04121
]
616685 (TRIM50)
Ubiquitin system [BR:
bta04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
616685 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
Prok-RING_4
zf-RING_4
zf-Nse
zf-RING_6
Retinal
U-box
SSNA1
TRIM_CC
zf-ANAPC11
CcmH
COG2_N
Trimer_CC
DUF7575
Motif
Other DBs
NCBI-GeneID:
616685
NCBI-ProteinID:
NP_001193185
BGD-bta:
BT18634
Ensembl:
ENSBTAG00000005798
VGNC:
97322
LinkDB
All DBs
Position
25
Genome browser
AA seq
487 aa
AA seq
DB search
MAWQVSVPELEDRLQCPMCLEVFKEPLMLQCGHSYCKGCLVSLSHHLASELRCPVCRQEV
DYSSSPPNVSLAKVIEALRLPGDPEPQVCAHHRNPLSLFCEKDQELICGLCGLLGAHQHH
RVTPVSTVYSRMKEELAALISDLKQEQKKVDEQIAKLVNNRTRIVNESDVFSWVIRREFQ
ELHHLVDEEKARCLEGVEGHTRGLVASLDMQLEQARGAQERLVQATGVLEQFGSESHHEF
IRKYHAMASRPELQQARLSEGAFSPISFKPGLHQADIKLTVWKRLFRKVLPAPESLKLDP
ATAHPLLELSKGNTVVQCGLLAQRRASQPERFDYSTCVLTSRGFSCGRHYWEVVVGSKSD
WRLGVIKGTASRKGKLSKSPEHGVWLIGLKEGRVYEAFGCPRVPLPVAGHPHRIGIYLHY
EQGELTFFDADRPDDLRPLYSFQADFQGKLYPILDTCWHERGSNSLPMVLPPPSGPGHLS
PLQPTKL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggcaggtgagcgtgcctgagctggaggaccgcctgcagtgtcccatgtgcctg
gaggtcttcaaggagcccctgatgctgcagtgcggccactcctactgcaagggctgcctg
gtgtccctgtcccaccacctggcctcggagctgcgctgccccgtgtgtaggcaggaggtg
gactacagcagctccccacccaacgtctccctggcaaaggtgatcgaagccctgcggctc
cccggggacccggagccccaggtgtgcgcacaccaccggaacccgctcagcctcttctgc
gagaaggaccaggagctcatctgtggcctctgcggcctgctgggcgcccaccagcaccac
cgggtcacacccgtctccaccgtctacagccgcatgaaggaggagctagcagccctcatc
tccgacctgaagcaggagcagaagaaggtagatgagcaaatcgccaaactggtgaacaac
aggactcggattgtgaatgagtccgatgtcttcagctgggtgatccgccgtgagttccag
gagctccaccacctggtggacgaggagaaggcccgctgcctggagggggtggagggccac
acccgcggcctcgtggcctccctggacatgcagctggagcaggcccggggcgcccaggag
cggctggtccaggccacgggtgtgctggagcagtttggcagcgagagtcaccatgagttc
atccggaagtaccacgccatggcctccagaccagagctccagcaggcccgactctcggaa
ggtgccttcagccccatctccttcaagccaggcctgcaccaggctgacatcaagctgaca
gtgtggaaaaggcttttccgaaaggttctgccagccccagagtccctcaagctggatcca
gccacggcccacccgctcctggagctctccaagggcaacacggtagtgcagtgtgggctc
ctggcccagcggcgcgccagccagcctgagcgcttcgattacagcacgtgcgtcttgacc
agcagaggcttctcctgcggccgccattactgggaggtggtggtgggcagcaagagcgac
tggcgcctgggggtcatcaagggcacggccagccgcaagggcaagctgagcaagtcccca
gagcatggtgtgtggctcatcggcctgaaggagggccgagtgtatgaggccttcggctgc
ccccgggtgcccctgcccgtggcgggccacccccaccgcatcggcatctacctgcactat
gagcagggggagctcaccttcttcgacgctgaccgccctgacgaccttcggccactctac
tcgttccaggctgacttccagggcaagctgtaccccatcctggacacgtgctggcatgag
aggggcagcaactccctgcccatggtgctgccaccacccagcgggcccggccacctctcc
ccactgcagcccaccaagctgtag
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integrated database retrieval system
