Bos taurus (cow): 616895
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Entry
616895 CDS
T01008
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X2
KO
K08528
retinoic acid receptor beta
Organism
bta
Bos taurus (cow)
Pathway
bta05200
Pathways in cancer
bta05222
Small cell lung cancer
bta05223
Non-small cell lung cancer
bta05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
616895 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
616895 (RARB)
05222 Small cell lung cancer
616895 (RARB)
05223 Non-small cell lung cancer
616895 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
616895 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
bta03310
]
616895 (RARB)
Transcription factors [BR:
bta03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
616895 (RARB)
Nuclear receptors [BR:
bta03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
616895 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
616895
NCBI-ProteinID:
XP_024842157
BGD-bta:
BT25815
Ensembl:
ENSBTAG00000011518
VGNC:
58402
UniProt:
A0AAA9SMT7
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Position
27:complement(40196705..40792265)
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AA seq
448 aa
AA seq
DB search
MFDCMDVLSVSPGRILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDL
TEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFAGQLLPLEMDDAETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRR
PSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
GGHTAEPSPSVSPSSVEHSGVGQSPLLQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgtcctgtcagtgagtcctgggcgaatcctggatttctacact
gcgagcccgtcttcctgcatgctccaggagaaggctctcaaagcatgcttcagtggattg
acccaaaccgaatggcagcatcggcacactgctcaatcgattgagacccagagcaccagc
tccgaggaactggtcccaagccccccgtctccgcttccgccgccccgcgtgtacaagccc
tgtttcgtctgccaggacaagtcgtccgggtaccactatggggtcagcgcctgcgagggg
tgtaagggctttttccgcagaagtattcagaagaacatgatttacacttgtcaccgagat
aagaattgtgttattaataaagtcaccaggaatcgatgccagtactgtcgactccagaag
tgctttgaagtggggatgtccaaagaatcggtcaggaatgacagaaacaagaagaagaag
gagccttcgaagcaggagtgcacggagagctacgagatgacggcagagctggacgacctc
accgagaagatccgcaaggctcaccaggaaaccttcccctcgctctgccagctgggcaag
tacaccacgaattccagcgctgaccatcgagtccggctggacctgggcctctgggacaaa
ttcagtgagctggccaccaagtgcattattaagatcgtggagtttgccaaacgcctgcca
ggtttcaccggcctgaccatcgcagaccagatcaccctgctgaaggccgcctgcctcgac
atcctgattctcagaatctgcaccaggtacaccccagagcaagacactatgacgttttcg
gacggcctgaccctgaatcgaacccagatgcacaacgccggctttggccctttgactgac
ctggtgttcaccttcgccggccagctcctgccgctggagatggacgacgcggagaccggc
cttctcagcgccatctgcctgatctgtggagatcgtcaggaccttgaggaaccaacaaaa
gtagataagctacaagaaccactgctggaagcactaaaaatttacatcagaaagagacgg
cccagcaagcctcacatgttcccaaagatcctgatgaagatcacagacctccgcagcatc
agcgcgaaaggtgcagagcgtgtaattaccttgaagatggaaatccctggttcgatgccg
ccgctcattcaggaaatgctggagaactctgaagggcacgagcccttgacccccagctcg
ggcggacacacggcggagcccagccccagcgtctcccccagctcggtggagcacagcggc
gtcggccagtccccgctgctgcagtga
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