KEGG   Bos taurus (cow): 617422
Entry
617422            CDS       T01008                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
bta  Bos taurus (cow)
Pathway
bta03020  RNA polymerase
bta03420  Nucleotide excision repair
bta05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    617422 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    617422 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    617422 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bta03021]
    617422 (POLR2D)
   03400 DNA repair and recombination proteins [BR:bta03400]
    617422 (POLR2D)
Transcription machinery [BR:bta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     617422 (POLR2D)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      617422 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 617422
NCBI-ProteinID: NP_001069926
BGD-bta: BT12260
Ensembl: ENSBTAG00000053244
VGNC: 33138
UniProt: Q1JQ91
Structure
LinkDB
Position
2:4623450..4635167
AA seq 142 aa
MAAGGSDPRSGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggcgggaggtagcgatccgcgctctggagatgtagaggaggacgcgtcacaactc
atctttcccaaagagtttgaaacagctgagacgcttctgaattccgaagttcatatgctt
cttgagcatcgaaagcagcagaatgagagcgcagaggatgagcaggaactttccgaggtc
ttcatgaaaactttaaattacactgcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgtagcttgctgctccagaagaagcttcataagtttgagttggcctgttta
gccaacctttgtccagagactgctgaggagtccaaggctctgatcccaagcctggagggg
cggtttgaagatgaggagctacagcagattcttgatgacatccagaccaagcgtagcttt
cagtattaa

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