Bos taurus (cow): 618135
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Entry
618135 CDS
T01008
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
bta
Bos taurus (cow)
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
618135 (SOX1)
Transcription factors [BR:
bta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
618135 (SOX1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
618135
NCBI-ProteinID:
XP_005214070
BGD-bta:
BT11732
VGNC:
35140
UniProt:
A0AAA9TNY9
LinkDB
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Position
12:86018876..86022110
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AA seq
369 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGSKANQDRVKRPMNAFMVWSRGQ
RRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRK
TKTLLKKDKYSLAGGLLAAGAGGGAAVAVGVGAAAVGQRLESPGGAAGGGYAHVNGWANG
AYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHPHNPQPMHRYD
MGALQYSPISNSQGYMSASPSGYGGLPYGAAGGAHQNSAVAAAAAAAAASSGALGALGSL
VKSEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPPHYQGAGAGA
NGTVPLTHI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcattcgcccggcggcgcccaggcgcccacg
aacctgtcgggcccggccggggcgggcgggggcggcggcggcggcggcgggggctccaag
gccaaccaggaccgagtcaagcggcccatgaatgccttcatggtgtggtcccgcggtcag
cggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctg
ggcgccgagtggaaggtcatgtccgaggccgagaagcggccgttcatcgacgaggccaag
cggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccggccgcggcgcaag
accaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctggcggccggt
gcgggcggcggcgcggccgtggccgtgggcgtgggcgcggcggccgtgggccagcggctc
gagagcccgggaggcgcggcgggaggcggctacgcgcacgtcaacggatgggccaacggc
gcctaccccggctcggtggcggcggcggcggccgccgcggccatgatgcaggaggcgcag
ctggcctacgggcagcacccgggcgcgggcggcgcgcacccgcacgcgcaccccgcgcac
ccgcacgcgcaccacccgcacgcgcacccgcacaacccgcagcccatgcaccgctacgac
atgggcgcgctgcagtacagcccgatctccaactcgcagggctacatgagcgcctcgccc
tcgggctacggcggcctcccctacggcgccgcgggcggcgcgcaccagaactcagccgtg
gcggcggcggcggcagcggcggccgcgtcgtcgggcgccctgggcgcgctgggctcgctc
gtcaagtcggagccgagcggcagcccgccggccgcggcgcactcgcgggcgccgtgcccc
ggggacctgcgcgagatgatcagcatgtacttgccggccggcgagggcggcgacccggcg
gcggcgcagagccggctgcactcgctgccgccgcactaccagggcgcgggcgcgggcgcc
aacggcacggtgcccctgacgcacatctag
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