KEGG   Bos taurus (cow): 618168
Entry
618168            CDS       T01008                                 
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
bta  Bos taurus (cow)
Pathway
bta03250  Viral life cycle - HIV-1
bta04144  Endocytosis
bta04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:bta00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    618168 (VPS4A)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    618168 (VPS4A)
  09143 Cell growth and death
   04217 Necroptosis
    618168 (VPS4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bta04131]
    618168 (VPS4A)
   03400 DNA repair and recombination proteins [BR:bta03400]
    618168 (VPS4A)
Membrane trafficking [BR:bta04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    618168 (VPS4A)
DNA repair and recombination proteins [BR:bta03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    618168 (VPS4A)
SSDB
Motif
Pfam: AAA MIT TIP49 AAA_16 AAA_22 AAA_14 IstB_IS21 AAA_25 AAA_5 RuvB_N DUF815 AAA_2 AAA_18 AAA_17 AAA_33 nSTAND3 RNA_helicase AAA_24 AAA_28 ResIII PhoH NACHT Mg_chelatase Parvo_NS1 AAA_7 DUF5906 ABC_tran YhdB bpMoxR AAA_30 Sigma54_activ_2 Viral_helicase1 Sigma54_activat MCM
Other DBs
NCBI-GeneID: 618168
NCBI-ProteinID: NP_001040080
BGD-bta: BT21233
Ensembl: ENSBTAG00000001659
VGNC: 110076
UniProt: Q2HJB1
LinkDB
Position
18:36458153..36472002
AA seq 318 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
MQYLDRAEKLKDYLRNKEKHGKKPVKENQSESKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGLKSEFISHCRRRLPVPRCSDCIWGALLTTSQRPTSTSWPGRQK
ATRVQTSASLCGTPSCSP
NT seq 957 nt   +upstreamnt  +downstreamnt
atgacaacgtcaaccctccagaaagccattgatctggtgacaaaagccacagaagaggat
aaagccaagaattacgaggaggctctccggctctaccagcatgccgtggagtacttcctg
cacgctatcaaatatgaagcacacagtgacaaagccaaggagagcattcgagccaagtgc
atgcagtacctggaccgggcggagaagctgaaggattacttacgaaacaaagagaagcat
ggcaagaagccagtcaaagagaatcaaagcgagagtaagggcagcgatagtgacagtgaa
ggggataatccagagaaaaagaaattgcaagagcagctgatgggtgccgtcgtgatggag
aagcccaacatccggtggaatgatgtggctgggctggagggagccaaggaggccctcaaa
gaagctgtcattttgccaattaaattcccgcacttgttcacaggcaagcgcaccccttgg
cgggggatactgctctttggaccgcccggcacagggaaatcctacctggccaaagcagtg
gcaacagaggccaacaactccaccttcttctctgtgtcctcctcagacttgatgtctaag
tggctgggggagagcgagaagctggtcaagaacctgttcgagctggcccgccagcacaag
ccctccatcatcttcatcgacgaggtggattcgctctgcggatcccgcaacgagaatgag
agcgaggctgcccgcaggatcaaaaccgagttcctagtccagatgcagggtttgaaaagc
gaatttatatcccattgccggaggaggctgcccgtgcccagatgttccgattgcatctgg
ggagcactcctcacaacctcacagaggccaacatccacgagctggcccggaagacagaag
gctactcgggtgcagacatcagcgtcattgtgcgggactccctcatgcagcccgtga

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