Bos taurus (cow): 618649
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Entry
618649 CDS
T01008
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
bta
Bos taurus (cow)
Pathway
bta04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
618649 (SHANK2)
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GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_3
Ank_4
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
618649
NCBI-ProteinID:
XP_005227439
BGD-bta:
BT28735
Ensembl:
ENSBTAG00000003171
VGNC:
56279
LinkDB
All DBs
Position
29:complement(47557811..48119364)
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AA seq
1894 aa
AA seq
DB search
MPRSPTSSEDEMAQSYSDSSEESDSDSSKEETIYDTIRATAQKPGGARAEEGQAHTLVLR
IVIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASNGRDGKFLDEER
LLREYPQPVGKGIPSLEFRYKKRVYRQTNLDEKQLAKLHTKTNLKKCMDHIQHRSVEKIV
KMLDRGLDPNFHDLETGETPLTLAAQLDDPEEIIKALRNGGAHLDFRAKDGMTALHKAAR
TRNLLALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHEHAAVSCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGGDKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDVVPLVPTRRTVPAAPPLSHRPAGGWAQSCI
LEEPSGLFPPAPGLHRTCSGEQAHWTSSVPFREAPAYSNRRRRPPSTLAAPRLLLRSNSD
NNLHAGAPDWAVCAATSRLSLSPQLLQQTPGKADGAAKTLGSYTPGPRSRSPSLNRLGGA
GEDAKRPQQPWHVGPAFPPGANKDVLSAFEYPGPRRKLYSAVPGRLFVVVKPYQPQVDGE
IPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVHCKPRDSQAETRADRSKKLFR
HYTVGSYDSFDASSDCVIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQY
LESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVTMIRQGGNHLVLKVVTVTRSLD
PDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELDKPEEIIPASKPSRAAESVALESRV
ATIRQRPTSRCFPSVADMNSVYERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQKSIDSRI
FLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTAYNCPKSPTP
RVYGTIKPAFNQNPATKVSPAARSDTVATIVREKGLYHRREVDRYSLDSEDLYSRGTGPQ
ANFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCSIPIPTI
IVKEPSTSSSGKSSQGSSVETDPQASEQPGQLRPDDSLTVSSPFAAAIAGAVRDREKRLE
ARRNSPAFLSTDLGDEDVGLGPPAPRARPSKFPEEGGFGEEDGAEPLSSPAPQEPENHFV
GAGEAGAQGEAGRLPNAPGQAKVPEGSPAATPRSINIASPENYVHPLTGRLLDPSSPLAL
ALSARDRALKESQQGPKGEAPKADLNKPLYIDTKMRPSGEAGFPPVGRQSGRGPLRRQET
ENKYETDPGKERRDDKKGVLVSIVDASQQKSAGLLMVHTVDAARPEDFLQEEDEKADPET
QPDHLPSEAPEGAPETEGAFPTPAGPEPTAAAATAPGRTIVAAGSVEEAVILPFRIPPPP
LASVDLDEDFIFTEPLPPPLEFANSFDIPDDRVASVPALSDLVKQKKNDTSQSPSLNSSQ
PTNSADSKKPAGLSNCLPASFLPPPESFDAVTDSGIEEVDSRGSSDHHLETTSTISTVSS
ISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKMKPIIHKGNTLYHDALLEEDVDSF
VVPPPAPPPPPGGAQPGPTKVIQPRTSRLWGDVSEVKSPILSGPKANVISELNSILQQMN
REKSAKPGEGLDPTPGTKPAGLAPRGPEVISTVSGTRSTTVTFTVRPGTSQPITLQSRPP
DYESRNSGPRRAPSPVVSPTELNKEVLPAPLPAATAAPSPTLSDVFSLPSQPPPGDLFGL
NPVGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKEAFMDNEIDGS
HLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcagccccacgtccagcgaggacgagatggcccagagctactcagactcctcg
gaggagtcggactcggacagttccaaggaggagaccatctacgacaccatccgggccacg
gcccagaagccgggcggcgccagggcggaggagggccaggcccacacgctggtgctgcgc
atcgtcatcgaggacctgcagcagacgaagtgcattcgattcaacccggatgcgacagtg
tgggttgcaaagcagcggattctgtgctcgctgaaccagagcctgaaggacgtcctgaac
tacgggctgttccagccggccagcaacgggcgcgacggcaagttcctggatgaggagcgg
ctgctgcgcgagtacccgcagcccgtgggcaagggcatcccgtccctggagtttcgctac
aagaagcgggtgtatagacagaccaacctggacgagaagcagctggccaagctgcacacg
aagaccaatttgaaaaaatgcatggatcacatccagcatcggtcagtggagaagatcgtc
aaaatgctggaccgaggcctggatccgaatttccacgacctggagactggagagactccc
ctgaccttggccgctcagctggacgaccccgaggagattatcaaggccctccggaacggc
ggagcccacctagacttccgtgccaaggatgggatgacagccttgcacaaagccgcccgc
accaggaacctgctggccctgaagaccctcttggagcttggcgcatccccggattataag
gacagctacggcctgaccccactgtatcatacggcggtggtcgggggcgacccctgctgc
tgtgagctgctgctccacgagcacgcggccgtgagctgcaaagacgagaacggctggcac
gaaatccaccaggcctgcaggtacggccacgtgcagcatctggagcacctgctcttctac
ggggccgacatgggggcccagaacgcctcggggaacaccgccctgcacatctgcgccctc
tacaaccaggacagctgtgctcgcgtgcttctgtttcgaggtggagataaggaactgaag
aactacaacagccagaccccgttccaggtggcgatcatcgccggcaactttgagctagcc
gagtacatcaagaaccacaaggagaccgacgttgtacccctcgtgccaaccaggaggact
gtccctgcggctcctcccctgtcccatcgccctgccggcggctgggcccagtcttgcatc
ttggaagagccctctggcctgttccctccagccccgggcttacaccggacgtgcagcggg
gagcaggcccactggaccagcagcgtgcccttccgagaggctccggcgtactccaaccgc
aggcggcggccccccagcacgctggccgccccgcggctcctgctgcgctccaacagcgat
aacaacctccacgccggtgcgcccgactgggctgtctgcgcggccacctcccgcctcagc
ctctcgccccagctgctgcagcagacgcccggcaaggccgacggggccgccaagaccctc
gggagctacacccccgggccccgcagccggtcgccctcgctcaacaggctgggcggagcc
ggcgaggatgccaagaggccccagcagccctggcacgtcggcccagctttcccgccagga
gccaacaaggacgtgctgtctgcctttgagtacccggggcccagacggaagctgtacagc
gcggtgcctgggaggctcttcgtcgtcgtcaagccataccaaccccaggtcgatggcgag
atccccctgcaccgtggcgacagggtcaaagttctgagcatcggcgaaggcggcttctgg
gaaggcagcgcccgcggccacatcggatggttcccggcagagtgtgtggaggaggtccac
tgcaagccccgggacagccaggcagaaactcgtgcagaccgcagcaagaaactcttccgg
cactacacagttggctcctacgacagcttcgatgcctccagcgactgcgttatcgaggag
aagaccgtggtcctgcagaagaaagacaatgagggcttcggattcgtgctccgaggggcg
aaagcggatacgcccatcgaagaattcacgcccacgccggcgttcccggccctgcagtac
ctggagtctgtggatgaaggcggggtggcatggcaagccggactgaggaccggggacttc
ttgattgaggtgaacaacgagaacgtcgtcaaggttggccaccggcaggtcgtgaccatg
atccgccagggagggaaccacctggtcctcaaggtggtcacggtgaccaggagtctggac
ccggatgacaccgcccggaagaaagctcctccgcctccaaagcgagctccgaccacggcc
ctcaccctgcgctccaagtccatgacctcggagctggaggagctcgataaacccgaggag
atcatcccagcctccaagccatcccgggctgccgagagcgtggcgctggagtccagggtg
gccaccatcaggcagcggcccaccagccggtgcttcccctccgtcgcggacatgaactcc
gtgtacgaacgccagggcattgccgtgatgacgcccactgtccccgggagcccaaagggc
ccgttcctgggcctccctcgaggtacgatgcgaaggcagaagtcaatagacagcagaatc
tttctatcagggataacggaggaggagcggcagtttctggccccgccaatgctcaagttc
accagaagcctgtccatgccggacacctccgaggacatcccgcccccgccgcagtcagtg
cccccgtctccaccgccaccctcccccaccgcctataactgccccaagtctccaactcca
cgagtctacgggacaatcaagcccgcgttcaaccagaaccccgccaccaaggtgtccccg
gccgctcgctccgacacggtggccaccatcgtgcgggagaaggggctctaccacaggcgg
gaggttgaccgctactccctggactccgaggacctctacagtcgcggcaccggcccccag
gccaacttccgcggcaagaggggccagatgcccgaaaacccgtactccgaggtggggaag
atcgccagcaaggccgtgtacgtgccagccaagcccgcccggcggaagggcatgctggtg
aaacagtccaacgtggaggacagccccgagaagacgtgctccatccccatccccaccatc
atcgtcaaggagccctccaccagcagcagcggcaagagcagccagggcagcagtgtggag
accgacccacaggcctcggagcagcctggccagctgcggccggacgacagcctgaccgtc
agcagccccttcgccgccgccatcgccggggctgtccgcgaccgcgagaagcggctggag
gcccggaggaactccccagccttcctgtccacggacctgggggacgaggacgtgggcctc
gggccgcccgccccccgggcgcgcccctccaagttccccgaggagggtggctttggcgag
gaggacggcgcggagcctctgtcgtcaccggcgccccaggagcctgagaaccactttgtg
ggtgcgggcgaggctggagctcagggtgaggctggcaggctgccaaacgccccgggccaa
gccaaggtgccggagggcagccccgcggcgaccccccggagcatcaacatcgccagcccc
gagaactacgtgcacccgctcacggggcggctgctggaccccagctcgccgctggccctg
gcgctgtcagcaagggaccgggccctgaaggagtcccagcagggccccaaaggggaggcc
cccaaggccgacctcaacaagcccctctacatcgacaccaaaatgcggcccagcggggaa
gcgggcttccctccggtcggcaggcagagcgggcgggggcccctgcggaggcaggagacg
gagaacaagtacgagacggacccgggcaaggagcgcagggacgacaagaagggcgtgctc
gtcagcatcgtagacgcctcccagcagaaatccgccgggctgctgatggtccacacggtg
gacgcggccaggccggaggacttcctgcaggaagaggacgagaaagccgacccggaaacg
cagccagaccatctgccatccgaggcgcccgaaggcgcccccgaaaccgaaggtgctttc
ccgacccccgcaggccccgagcccacggccgccgccgccaccgcgcccggcaggaccatc
gtggcggcgggctccgtggaggaggcggtgatcctgccgttccgcatccctcccccgcct
ctggcatccgtggacctggacgaggattttattttcacagagccattgcctcctcccctg
gaatttgccaatagttttgatatccccgatgaccgggttgcttctgtccccgctctctca
gacctggtcaagcagaaaaaaaacgacacctcccagtccccttccttgaactccagccag
ccaaccaactccgcagacagtaagaagccggctggtctctcaaactgtctgcccgcctca
ttcctgccgccccccgaaagctttgacgccgtcacggactccgggatcgaggaggtggac
agccggggcagcagcgaccaccacctcgagacgaccagcaccatctccacggtgtccagc
atctccaccctgtcctccgagggcggggagaacgcggacacctgcacagtctatgcagac
gggcaagccttcatggttgacaaacccccagtacctcccaagccaaaaatgaagcccata
atccacaaaggcaacaccctctaccacgatgcgctgctggaggaggacgtggacagcttc
gtggtccccccgcctgcacctccgccgccgcctggcggggcccagcccggccccacgaag
gtcatccagccaaggacctccaggctgtggggggacgtctccgaggtcaaaagcccgatt
ctctcaggcccaaaggcgaacgtgattagtgagttaaactcaatcctgcagcaaatgaac
cgagagaaatctgcaaagccgggggaaggactggacccaacgccaggaaccaagcccgcc
ggcctcgcccccagaggccccgaggtcataagcaccgtctcaggtacacggagcacgaca
gtcaccttcaccgtccgccctgggacctcccagcccatcaccctgcagagccggcccccg
gactacgagagcaggaactcaggacccagacgcgcccccagccctgtggtctcaccaaca
gagcttaacaaagaggtcctgcccgcccccctgcctgccgccactgcggccccctcaccc
accctctcggatgtcttcagccttccgagccagcccccgcccggggacctgtttggcttg
aacccagtgggacgcagcaggtcgccgtccccctccatcctgcaacagccaatctccaat
aagccttttacaactaagcctgtccacctgtggactaaacccgacgtggcagactggctg
gaaagtctaaacctgggtgaacataaagaggccttcatggacaatgagatcgacggcagc
cacctcccaaacctccagaaagaagacctcatagatctgggcgtgactcgagtcgggcac
agaatgaacatagaaagggctctcaaacagctgctggacagataa
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