Bos taurus (cow): 781067
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Entry
781067 CDS
T01008
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
bta
Bos taurus (cow)
Pathway
bta05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
781067 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bta03036
]
781067 (JMJD1C)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
781067 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
781067
NCBI-ProteinID:
NP_001178051
BGD-bta:
BT15034
Ensembl:
ENSBTAG00000001573
VGNC:
30376
LinkDB
All DBs
Position
28:complement(19314348..19630515)
Genome browser
AA seq
2534 aa
AA seq
DB search
MAVETRPELVGKRFLCLALGEEARLERGESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRINPSQTQGSKSKQIQWPALTFKPLVEKS
VPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKVWVKEQKVQE
IFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQM
TFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMNSQTAVPKQNS
HQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKKQVMNKRRKAEEDEKKLN
MKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSKINGEEGKSQNNEKAE
ETLIDSQHPWDQIQEDKKHEETEKQKSVDFQRQEKMIIHSSEQATLSDHNSSDLLLQERN
TEKTHTMELLPKEKFVSRPPTPKCVIDITNDTNTEKVAQETSSSTFGLQTLQKMDPNVSD
SKHSIANTKYLETGNQDSDQNWVSDVVKVDLTQSNVRNASSGNENLSMEKEKNQYVSYLS
SLSAVSVTEDKLHKRSPPPETIKSKLNTSVDAPKTKSNPSPEVVKPKVNHSPDSVKSKAT
YANSQAAGERRPANKIEHELSRCSFHPVPTRGSTLETTKSPLIIDKNEHFTVYRDPALIG
SDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTHP
LTSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLETAHASSLSHLALAHQQQQQLLQHQS
PHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSKWVHPENAVNAEPSLRRNSPS
PWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKIAAHSSPPLTKCLVDHHKEELERKA
FIEPLRSVASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETGERLNKYKEEH
RRILQESIDVAPFTTKIKGLECDRDNYSRVASSSSSPKSHVIKQDKDIETDLYKMKHSVP
HSLPQSNYFTTLSNSVVNEPPRSYPSKEISNIYTEKQSNTLATAANPQTLTSFISSLSKP
PPLIKHQPESEGLVGKVPEHLSHQFASHSVTTFRNDCRSPTHLTVSSTNTLRSMPALHRA
PVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDTQASFKS
SSEQSLTEMWKSNNNLSKEKAEWRVEKSSGKSQAAMASVIVRPPSSTKLDSVPAVQLASK
ERVSERSSLGANQTDCLKPAEAGESGRVILPSVNSDSAHIKSEKNFQAVSQGSVPSSVTS
AVSTVCNTKTDTFTSAATAPGVSSWGGSEIIYSLSNTILASKSLECTSSKSVSHSVAQTQ
ECTVSITAPVTPASSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSETEPNA
AKSQTSSASHLLDSTVVCSTINKADSVGNGQASQTSQPNYHTKLKKAWLTRHSEEDKNTN
KMENSGSSVSEIIKPCSVNLIASTSNDLQNSVDSKIIVDKYVKDDKVNRRKAKRTYESGS
ESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEMEEDLKPNGILSRSAKEKSKLKL
QSNNNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKGEEPT
HSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIETSKYIL
DIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFV
VCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHTLREK
YGIKSHCHCTNKQNIQVGNFSPMNGVSQVLQNVLNHSNKISLCMPESQQQSTPQKPESNG
SSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEKQIKEEREQDDPD
SPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGTPSGKSGRTMP
NILDDIIASVVENKIPPNKASKINVKSEFKEEPKESRKSAMDENSKLYSDIPHSWICEKH
ILWLKDYKNTNNWKLFKECWKYGQPAVVSGVHKKMNISLWKADSISLDFGDHQADLLNCK
DSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMPARYEDLLKSLP
LPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEVSDVVNIL
VYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKIREFL
QKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTLVQFLGDAIVLPAGALH
QVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRA
LKIHEDEVEAMEEN
NT seq
7605 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctttgcctggcgctcggc
gaagaggcgcggctggagcgcggggagagcggacgctgctggcggggctggcgagcgggg
gttatccgagcggtgtcacacagggacagccgcaatcccgacctggcggtgtatgtggaa
tttgatgatcttgagtgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggatcaaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgactttcaaacccctggttgaaaaaagt
gtacccagttcaatcactgcagtagaattccttgtagataaacaactggattttttaact
gaagatagtgcctttcagccctaccaggacgacatagacagcctaaacccagttctcagg
gacaacccgcaacttcaggaagaagtgaaagtctgggtaaaggaacaaaaggttcaggag
atttttatgcaaggtccttactccttgaatggatacagagtgagagtatatagacaagac
tctgccacccagtggttcactggcataattactcatcatgatctcttcactcgcaccatg
atcgttatgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatg
acctttctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatca
cggcgaaggtctcgtgccagtcaaaatagcaacactgttcacggtcattatacacgtgcc
caagcaaatagtcccagaccagcaatgaactcccaaactgctgtaccaaaacagaattca
caccagcaacaaagaaatattcgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaggaggaaaaatatgattatatagcacgaggagaaaatcctaaa
ggtaaaaaacaggtgatgaacaaaagaaggaaagctgaggaggatgaaaagaaactaaat
atgaaaagactgcgaaccgacaatgtttcagacttttctgagagtagtgactcagaaaat
tcaaataagagaataataaataattcctcagagcagaagccagagaatgagttgaaaaat
aaaaacacttcaaagataaacggagaagaaggaaaatctcagaataatgagaaggcagaa
gagacactaatagatagccagcatccctgggatcaaatacaggaagataaaaaacatgaa
gaaacagagaaacagaaatctgttgactttcagcgtcaagaaaaaatgattatccattca
tcagaacaggccacactttctgatcataattctagtgatttacttcttcaggaacgtaat
acagagaagacacacacaatggaattattaccaaaggagaagtttgtatccagaccgccc
actccgaaatgtgttattgatattacaaatgacactaacacagaaaaggtggctcaggaa
acctcaagtagtacctttggccttcaaacacttcagaaaatggatcctaatgttagtgat
tcaaaacattcaattgcaaatacaaaatacttggaaacaggaaaccaagattctgaccag
aactgggtcagtgatgtagttaaagtagatttaacccaatcaaatgtaaggaatgcttct
tcaggaaatgaaaacttgagtatggaaaaagagaaaaatcagtatgtctcttacttatct
tctctaagtgctgtttctgtcacagaagataagctgcataagcgaagtccacctccagaa
actataaaatctaaacttaatacttcagtagatgctcccaagacaaaatccaatccctcg
cctgaagttgttaagcctaaagtcaaccattcccctgattctgtaaagtctaaagccact
tatgcgaacagccaagctgctggtgaaagaagaccagcaaataagatagaacatgagtta
tcaagatgcagttttcacccggttcctactagaggcagtacattagaaactacaaaaagc
cctctaatcattgataaaaatgaacattttacagtttacagagatcctgcacttattggg
tcagatacaggagctaaccacatttcacctttcttaagccagcatccttttcctcttcat
tcttcatcccatagaacatgtttaaatccaggtacccatcatcctgccttaactcctgca
ccccacttactggctggatcatccagtcaaactccattacctaccattaacactcaccct
ctgactagtggtccacaccattctgttcatcaccctcatttacttcctactgtgttaccc
ggagtgcctactgcctccttacttggtggccacccacgactagagactgctcatgccagc
agcttgagccacttagcattagcacaccagcaacagcaacagttgttacagcaccagtca
cctcatctccttggacaagcccatccatctgcttcatataatcagcttggactttatcca
attatttggcaatatccaaatggaacacatgcatactcaggacttggtctgccttctaag
tgggttcacccagaaaatgcggttaatgctgaaccttcattaaggaggaattctcccagt
ccttggttacatcagcctacccctgtgacctcagcagatggtattggattacttagtcac
attcctgtcagaccttccagtgcagaacctcatcggcctcttaaaatcgcagcacattcc
agtccgccactgacaaaatgtttagtagatcaccataaagaagaattggagaggaaagct
ttcattgaaccactgcgttctgttgcatccacatcagccaaaaatgacctggatctaaac
aggtcacagactggaaaagatggtcacttgcataggcattttgtggatcctgtattgaat
caattacagagaccaccccaggaaactggagagagattaaacaaatataaggaggaacac
cgtcgaattcttcaagaaagtattgatgttgctccctttacgactaaaatcaagggtctt
gagtgtgatagagataattattccagagtagcatcgtcatcttctagccctaagagccat
gtcatcaaacaagacaaggatatagaaacagatctttataaaatgaagcactcagtgcct
cacagtttgcctcaaagtaactatttcactacattgtctaatagtgtagtcaatgaacca
ccaaggtcatacccatccaaagagatttcaaatatttacactgaaaaacagagtaatacc
cttgcaacagcagctaatcctcaaactctgacttcatttatatcatctctttcaaagcct
ccacctttgataaaacatcagccagaaagtgaaggtttagtaggcaaggtaccagaacat
ctttcccatcaatttgcttctcactcagtaacaactttcagaaatgactgtaggagtcct
actcatttgacagtttcttctacaaatacactccggagtatgcctgctttacatagagca
ccagtatttcacccgccgatccatcatagcctggaaagaaaggaaagcagctatagtagc
ctttcccctccaacgttaactccagtgatgcctgtaaatgctggtgggaaagttcaggaa
tcacaaaagcctcccacactgattcctgagccaaaagatactcaggcaagttttaagagt
tcttctgaacagagtttgacagaaatgtggaaatctaataataacctcagcaaagagaaa
gctgaatggcgtgtagagaaaagcagcggaaagtcccaggctgccatggcgtctgtcatc
gtgcgtccaccttcaagtacgaaactcgacagcgtgccagcagtacagttagcttccaaa
gagcgagttagtgaaagatcttcacttggggcaaatcaaacagattgcctcaaaccagca
gaagctggagagagtggaagagtcattctgccaagtgtgaattcagacagtgctcacata
aaatccgaaaaaaactttcaggctgtctcacagggcagtgttcccagttcagtcacgtct
gctgtaagtacagtgtgtaataccaaaacggatacattcacatctgctgccactgccccc
ggtgtttccagctggggtggttcagaaataatttactcattatcaaataccattttggcc
tctaaatccttagaatgtacctcttcaaaaagcgtcagtcattcagtggctcaaacacaa
gaatgcacggtcagcatcacagctccagttacaccagccagcagtaagacaggaagtgct
gttcagcccagctctgggttttcaggcacaactgattttattcatttaaagaagcacaag
gcagcgttggccgcagctcaatataaaagtagtaatgtcagtgagactgagcctaatgct
gcgaaaagtcagacgtcttcagcctcccatctcttagatagcactgtagtctgtagtaca
ataaacaaagcagactctgtaggaaatgggcaagcatcccagacaagtcaaccaaactac
catactaaactgaaaaaagcctggcttacgagacattcagaagaagataaaaatactaat
aaaatggaaaattcagggagttctgtatcagaaattattaagccatgttctgtcaattta
atagcctctacatctaatgatctacaaaatagtgtagatagtaagatcatagttgataaa
tatgtaaaagatgataaagtaaatagaagaaaagccaaacgaacttatgaatctggctcc
gaaagtggagattcggacgaaagtgaaagcaaatcagagcaaaggactaaaaggcaacct
aagccaacttacaaaaagaagcaaaatgatcttcaaaagagaaaaggtgaaatggaagaa
gatttaaaacccaatgggattctcagcaggagtgccaaagaaaaaagtaaattgaagttg
cagagcaacaataatactggcatccctcgttcagtgttgaaagattggcgtaaagtcaag
aagctgaagcaaactggggaatcctttttacaggatgactcctgctgtgagatagggcct
aatttgcaaaagtgccgagaatgtagacttattcggagtaaaaagggagaagaaccaact
cactcaccagtgttttgtagattttactactttagacgattgtcatttagtaaaaatgga
gtggttagaatagatggtttctcttctcctgaccagtatgatgatgaagctatgagttta
tggacacatgaaaattatgaagatgatgaactagacatagaaacatcaaaatacatcttg
gacataataggtgataagttctgtcagttggtaacatctgaaaaaacagctttgtcctgg
gtgaaaaaggatgccaaaattgcctggaaaagagcagtgaggggagtccgggagatgtgt
gatgcatgtgaagcaacattgttcaacattcactgggtctgccaaaaatgtggatttgtg
gtctgcttagattgttacaaggcaaaggaaaggaagagttctagagataaagaattgtat
gcttggatgaagtgtgtgaagggacagcctcatgatcacaaacatttgatgccaactcaa
attattcctggttctgttttgacagatcttttggatgcgatgcacactcttagagaaaaa
tatggtattaaatcccattgtcattgtactaacaaacagaatatacaagttggaaatttt
tctcctatgaatggtgtgtctcaagttttacagaatgttcttaatcacagtaataaaatt
tctctgtgcatgcctgagtctcagcagcaaagtacccctcagaagcctgaaagtaatggc
agcagcagtccagggagtgatgtgagcacagacagcaagttaactcctccagaatcccag
tcacccctgcactggttagcagatcttgcagagcaaaaggccagagaggaaaaaaaagaa
aacaaagaatttgcccttgaaaagcaaataaaagaagagagagaacaagatgatcctgat
tctccaaatagtagaacatcacctcctgtatcccagaataatgagcaaggttcaacatta
cgagatttgctgaccacaaccgctggcaagctacgcgtggggtctacagatgctggcatt
gcctttgcaccagtttattcaatgggaacccccagtggtaaaagtggaaggactatgcca
aacattcttgatgacataattgcttcagttgttgaaaacaaaattccaccaaataaagcc
tctaagataaatgtaaaatcagagttcaaagaagaacccaaagaaagcagaaaatctgcc
atggatgaaaacagtaaattgtacagtgatataccacattcttggatctgtgagaagcat
attctgtggcttaaggattataaaaatactaataattggaagcttttcaaagagtgttgg
aaatatggacaacctgcagtggtttctggcgtgcataagaaaatgaacattagcttgtgg
aaggcggactcaattagtcttgattttggagaccaccaagctgatctcctcaactgcaaa
gacagcattatttcaaatgccaatgttaaggaattctgggatggttttgaggaagtttca
aaacggcaaaaaacaaaaagtggagaaacagttgttttaaaattgaaagactgcccttca
ggagaagacttcaagactatgatgccagcaagatatgaagatcttttaaaaagcctgccg
ttgccagaatattgtaatccagaaggaaagttcaacctggcctctcacttaccgggattt
tttgtgcgccctgatctaggacccaggttgtgcagcgcttatggtgtagctgctgctaaa
gatcatgatataggaacaacaaatctacatgttgaagtttctgatgttgtaaatattcta
gtctatgttggcatagcaaaaggaaatggcattctctcaaaagcaggaatactcaagaaa
tttgaggaagaagatttggatgacattttaagaaaacgattgaaggactcaagtgaaata
cccggtgctctgtggcatatttatgctgggaaagatgttgacaagatacgggaatttctt
cagaagatttcaaaagaacaaggccttgaagttctaccagaacatgatccaatacgtgac
cagagttggtatgtgaacaaaaagcttcgtcaaagactgcttgaggaatatggagtcaaa
acctgcactctggttcagttcctcggtgatgccattgtcttaccagcaggagcacttcat
caggtacagaattttcacagctgtattcaggtaaccgaagactttgtgtctccagaacat
ctcgtacagtcatttcatttaacacaggaactgagacttttgaaggaagaaatcaattat
gatgataaactacaggttaaaaatatcttgtatcatgcagtcaaggaaatggtgagagct
ttgaagatacatgaagatgaagtagaggctatggaagaaaattag
DBGET
integrated database retrieval system
