Bos taurus (cow): 781181
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Entry
781181 CDS
T01008
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
bta
Bos taurus (cow)
Pathway
bta03013
Nucleocytoplasmic transport
bta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
781181 (UPF2)
03015 mRNA surveillance pathway
781181 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
781181 (UPF2)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
781181 (UPF2)
mRNA cycle factors
P-body specific factors
781181 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
781181
NCBI-ProteinID:
XP_003586795
BGD-bta:
BT23475
Ensembl:
ENSBTAG00000000288
VGNC:
36681
UniProt:
F1MQ83
LinkDB
All DBs
Position
13:12300764..12396488
Genome browser
AA seq
1271 aa
AA seq
DB search
MPAERKKPASMEEKESSLNSKEKDCSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEEERKKQEEQVKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESSKDDSKETKEPKDNKEVSSPDDLELELENLEINDDTLELEGGDEAE
DLTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANR
KKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIE
TKNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESH
LRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYK
DLSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDV
GIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGV
NSDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEV
WTKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKD
SMTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTD
SNKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVA
IPLHLKSQLRKGPPLGGGEGETESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQ
QQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNA
DLIFKTGGRRR
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatcttcactaaacagc
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggag
atcaagcttactgccaagaaggaggttattaaggtccctgaagataagaagaagaaactg
gaagaagataaaagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaggaattaaagaaaaaagaggaagaagaaaaaaagaaacatgaagaagaa
gagagaaagaagcaagaagaacaggtgaaacgtcagcaggaagaagaggctgcccagttg
aaagagaaagaggaatcccttcagcttcatcaggaagcttgggaacgacatcagttgagg
aaagaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactatt
acagaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaggctgtcgcttctattgtggaagcaaagctaaaaatatctgacgtgaattgt
gctgtgcacttatgctcgctctttcaccagcgctatgccgactttgccccatcacttctt
caggtttggaaaaaacattttgaagccaggaaagaagagaaaacacctaacattaccaag
ttaagaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaag
gaaggtctttcattaatctatgaacagctaaaaaatattattaatgctgatcgggaatcc
catactcatgtttctgtggtgattagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctcctagt
gagataattagtccagagaaacagcaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacatctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagttaagtgaagatagacataaacagtatgaagaa
tttgctatgtcttatcaaaagctactggcaaattctcaatccttagcagaccttttggat
gaaaatatgccagatcttcctcaagataaaccaacaccagaagagcatgggcctggaatt
gatatatttacacctggtaaacctggagaatatgacttagaaggtggtatatgggaagat
gaagatgctcggaatttttacgagaacctcattgatttgaaagcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgtcagaataaagagtccagcaaggatgattccaaa
gagacaaaggaacctaaggataataaggaggtatcaagtcctgatgatttggaacttgag
ttggagaacctggaaattaatgatgacacattggagctagagggtggagatgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactgga
tctcatctcaagctcatagtagatgctttcctccagcagttacccaactgcgtcaaccgt
gatctgatagacaaggcagcgatggacttttgcatgaacatgaacacgaaagcaaatagg
aagaagttggtacgggcgctctttatagttcccagacaaaggttggatttgctaccattt
tatgcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgt
tccatgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaa
acaaagaacaaaactgttcgttttattggagaactcactaagtttaagatgttcacaaaa
aatgatacactgcattgtttaaagatgcttctatcagacttttcccatcaccatattgaa
atggcatgtaccctactggaaacatgtggaagatttcttttcagatctccagaatctcac
ctgaggaccagtgtacttttggaacaaatgatgagaaagaaacaagcgatgcatcttgat
gcaagatatgtcacaatggtggagaatgcatattactactgcaacccccctccagctgaa
aaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaagctcttgtacaaa
gatctctccaaggttaccaccgagaaggttttgagacagatgagaaagttgccttggcag
gatcaggaagtgaaagactatgtgatttgttgtatgataaacatctggaacgtgaaatac
aacagcattcactgtgtagccaacctcttagcaggactagtgctctaccaggaagatgtt
ggcatccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaa
cctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataattac
agaatggtggaatcggccgttatttttagaactctttattcttttacttcatttggtgtt
aactctgatggctctccaagttcactggaccctcctgagcaccttttcaggattagactg
gtgtgcactattttggatacctgtggccagtactttgacagaggttccagtaaacgaaaa
ctcgattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggaggtt
tggacaaaagaccatccatttcctattgacatagattacatgatcagtgacacactagaa
ctgctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacac
gacttggaacgagaattcttaataaaactaggcctcgtaaatgataaagactctaaagat
tctatgacagaaggagaaaatcttgaagaagatgaagaagaagaagaaggaggagctgaa
acagaggaacaatctggaaatgaaagtgaagtgaatgagccagaggaagaggagggttct
gataatgatgatgatgaaggggaggaggaagaggaagagaatacagattatctcacggat
tcaaataaagagaatgaaactgatgaagaaaatactgaggtaatgattaaaggaggtgga
ctgaaacatgtaccttgtgtagaagatgaggacttcattcaagctctggataaaatgatg
ctagaaaaccttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgcc
attcccttgcacctcaaaagccagctgaggaaaggacccccacttggtggtggggaggga
gagacagagtctgcagacacaatgccatttgtcatgttaacccgaaaaggcaataagcaa
cagtttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcactggaaccag
caacaagcagaacaagaagagaggatgagaatgaaaaagctcacactagatatcaatgaa
cggcaagaacaagaagattatcaagagatgctgcagtctcttgcacaacgcccagctcca
gcaaacaccaatcgggagcggcggcctcgttaccagcacccaaagggagcgcctaatgcg
gatctaatctttaagactggtgggaggagacgttga
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integrated database retrieval system
