Bos taurus (cow): 783569
Help
Entry
783569 CDS
T01008
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
bta
Bos taurus (cow)
Pathway
bta03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
783569 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bta03019
]
783569 (CSTF2T)
Messenger RNA biogenesis [BR:
bta03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
783569 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
783569 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
783569
NCBI-ProteinID:
NP_001229511
BGD-bta:
BT15546
Ensembl:
ENSBTAG00000018406
VGNC:
27782
LinkDB
All DBs
Position
26:7514194..7516582
Genome browser
AA seq
642 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQSVSGPGPGLCPGPNVLLNQQNPPAPQPQHLARRP
VKDIPPLMQTPIQGGIPPQGPMPAAVPGPGPLTPGGTMQPQVGMPGVGPVPLERGQVQIS
DPRAPMPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHAA
GHDSRGPSSHEMRGGPLADPRMLMSEPRGPMIDQRGLPMDGRGSRDSRGMETRAMETEVL
ETRVMERRGMETCAMETRAMEARGMDARGMEMRGPGPSSRGPMTGGIQGPGPINMGAGGP
QGPRQVPSISGVGNPGPGMQGAGMQGGGMQGAGLQGAGMQGAGMQGGGMQGPGMQGAGMQ
GPGMQGAGMQGAGMQGAGMQGAGMQGAGMQGPGMQGAGKQGGGQPSSFSPGQSQVTPQDQ
EKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGTS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcaatggatcgatcactgcgttccgtgttcgtg
gggaacattccgtatgaggcgactgaggagcagttaaaggacattttctcggaggttggt
tctgttgtgagtttccggctggtatacgatagagagacgggcaaacctaagggttatggc
ttctgcgagtaccaagaccaggagaccgcacttagtgccatgcggaaccttaatgggcgg
gagttcagcgggagagcgcttcgggtggacaatgcagccagtgaaaagaacaaggaggag
ctaaagagcctagggcctgcagcgcctatcattgactcaccctacggggaccctatcgat
ccagaagatgctcctgagtcgattaccagagcagtcgccagtcttcccccggagcaaatg
tttgagctgatgaagcagatgaaactctgtgtccaaaacagccaccaggaagctcgaaat
atgttacttcaaaacccacagctggcttatgcgctgttgcaggcacaagtagtgatgaga
atcatggatccagagattgctctgaaaattttgcatcgcaaaattcatgtcacaccactc
atcccagggaaatctcaatccgtttctggccctggccctgggctctgtcctggacctaac
gttctgctgaaccagcagaaccccccggcccctcagcctcaacatttggccagaagacct
gtgaaagacatccctcctctgatgcagacccctatccaaggtggaattccaccccaaggc
ccaatgccagccgcagttcctggccctggccccttaactcctggcggaacaatgcagccc
caagttggaatgccaggggttggtcccgtgcccttagagcgggggcaggtgcagatatct
gatcccagagctcctatgcctcgtgggcctatgactgctggtggcctgcctcctcgagga
ctgttaggggatgctccaaatgacccacgtggagggactttgctttcagtcaccggagaa
gtggagcccagaggctatcttggcccaccgcatcagggtcctccaatgcaccatgccgct
ggtcatgacagccggggcccttcctcacatgagatgaggggagggcccttagcagatcct
agaatgctcatgagtgagcccagaggacctatgatagaccaaagggggctacctatggat
ggcagaggcagcagagactctcgagggatggagactcgagccatggaaacagaggtcttg
gagacacgagtgatggagagaagaggaatggagacctgtgcaatggaaaccagagcaatg
gaagcgagaggcatggatgcaagaggaatggagatgaggggccctggccccagttcgaga
ggccctatgactgggggaattcagggtcctggtcctattaatatgggggcaggtggtcct
cagggacccagacaggttcccagcatttcaggggtgggaaaccctggacctggcatgcag
ggggcaggtatgcaaggaggtggcatgcagggggcgggcttgcaaggagctggcatgcag
ggggcgggcatgcaaggaggtggcatgcaggggccaggcatgcaaggagcgggcatgcag
gggccgggcatgcaaggagctggcatgcagggggcgggcatgcaaggagctggcatgcag
ggggcgggcatgcaaggagctggcatgcaggggccgggcatgcaaggagctggcaagcag
ggtggaggccagcctagcagttttagtcctgggcagagccaagtaaccccccaggatcaa
gaaaaggcagctttgatcatgcaggttcttcagctgactgcagatcagattgccatgctg
cctcctgagcaaaggcagagtatcttgattttaaaggaacaaatccagaaatctactgga
acttcttga
DBGET
integrated database retrieval system
