Bos taurus (cow): 784383
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Entry
784383 CDS
T01008
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bta
Bos taurus (cow)
Pathway
bta04390
Hippo signaling pathway
bta04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
784383 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
784383 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bta03000
]
784383 (SOX2)
Transcription factors [BR:
bta03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
784383 (SOX2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
784383
NCBI-ProteinID:
NP_001098933
BGD-bta:
BT19727
VGNC:
35146
UniProt:
A2VDX8
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Position
1:complement(85302293..85303771)
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AA seq
320 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagc
ccggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcggcgc
aagatggcccaagagaaccctaagatgcacaactcggagatcagcaagcgcttgggcgcc
gagtggaaacttttgtccgagacggagaagcggccgttcatcgacgaggccaagcggctg
cgagcgctgcacatgaaggaacacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacactgccgggagggctgctcgccccgggcggcaac
agcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgcatg
gacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggaccag
ctgggctacccgcaacacccgggcctcaacgcgcacggcgccgctcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtacaactctatgaccagctcgcagacctacatg
aacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcgctt
ggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacctct
tcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccagcac
taccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcacatg
tga
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