Bos taurus (cow): 788127
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Entry
788127 CDS
T01008
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bta
Bos taurus (cow)
Pathway
bta03440
Homologous recombination
bta03450
Non-homologous end-joining
bta04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
788127 (RAD50)
03450 Non-homologous end-joining
788127 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
788127 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bta03032
]
788127 (RAD50)
03400 DNA repair and recombination proteins [BR:
bta03400
]
788127 (RAD50)
DNA replication proteins [BR:
bta03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
788127 (RAD50)
DNA repair and recombination proteins [BR:
bta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
788127 (RAD50)
BRCA1-C complex
788127 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
788127 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
788127
NCBI-ProteinID:
NP_001193797
BGD-bta:
BT16302
Ensembl:
ENSBTAG00000011252
VGNC:
52870
UniProt:
G3X6W2
LinkDB
All DBs
Position
7:complement(21765852..22018104)
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSIQGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGEVVAVQRSMLCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSREI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALESRKKQMEKDNSELEQKMEKVFQGS
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHMQARDSLIQSLATQLELDGFELGPFSERQIKNFHRLVRERQEKEAETASQLLNDFVR
KEALKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELKNVKYELQQLEGSSDRILELDQE
LTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTATRTQMEM
LTKDKADKDEQIRKIKYRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINTELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRGFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGAIIP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRSVQQVNQEKQEKQHKLD
TVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LHREIKDAKEQLSPLETTLEKFQQEKEELINKKNTSHRTAQDKINEIKEKVKNIHSYMKD
IENYIQDGKDDYKKQKETELNKVIAQLSECDKHKEKINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIIMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIEQCSQIVTCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattcagggcgtgcggagttttggaatagaggataaa
gataaacaaattatcactttcttcagtccccttacaattttggttggacccaatggggcg
gggaaaacgaccatcattgaatgtctaaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctacagtttcgtgatgtcaatggagaagttgtggctgtgcagagatctatg
ctttgtactcaaaaaagcaaaaagacagaatttaaaaccttggaaggagtcattactaga
acaaagcatggtgaaaaggtcagtctcagctccaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaaatctgtgctaaataatgtcattttctgtcaccaagaa
gaatccaattggcctttaagtgaaggaaaggctttgaagcaaaagtttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacggcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcaaaacaaagaaaaagct
tgtgagattcgtgatcagattactagtaaagaagcccagttaacatcctcgagggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagactcgacaatgaaattaaagctttggaaagccgaaagaag
caaatggaaaaagataatagtgaactggaacagaaaatggaaaaggtgtttcaagggtct
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agattggtagactgtcagcgtgaactggaaaaattaaataaagaatctaggcttctcaat
caagaaaaatcagaactacttgtggaacagggccgtctacaactacaagcagatcgtcat
caggaacatatgcaagctagagattcattaattcagtctctggcaacacagctagaattg
gatggctttgagcttggaccattcagtgaaagacagataaaaaattttcacaggcttgtg
agagagaggcaggaaaaggaagcagaaactgccagccaactgttgaatgacttcgtacga
aaagaggctctgaaacaaaaacaaatagatgagataagggataagaaaactggactggga
agaataattgagctaaagtcagaaatcctaactaagaagcagaatgagctgaaaaatgtg
aagtacgaactacagcagttggaaggctcttcagacaggattcttgaactggaccaggag
ctcacaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaaactcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ctggaccaggagatggagcaattaaaccatcatacagcaacacgtacccagatggagatg
ctcaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatataggcatagt
gatgaattaacttcgttgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaagttgaacaaggaa
ctagcttcagctgagcaaaataaaaatcatataaatactgagctaaaaaggaaggaagag
cagttgtccagctatgaagacaaattgtttgatgtctgcggcagccaggattttgaaagt
gacttggacagacttaaagaagaaattgaaaaatcgtcaaaacaacgagccatgttggcc
ggagctacagcagtttattcccaattcattactcagctgacggatgaaaaccagtcgtgt
tgccctgtctgtcagagaggttttcagacagaagctgaattacaagaagtcatcagtgat
ttgcagtccaagctgaggcttgctccagataagctcaagtcgacagaatcagagttaaag
aaaaaagaaaagcggcgtgatgaaatgctgggactggtgcccatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtgaacagagac
atacagcgcctcaagaatgacatagaagaacaggaaacactcttgggtgcaattatacca
gaggaagaaagtgctaaagtgtgtctgacagatgttacaattatggagaggctccagatg
gaactaaaagatgttgaaagaaaaattgcacagcaagcagctaaactccaaggactagat
ttggatcgaagtgttcagcaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttctagtaagatagaattgaaccgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagcacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcagctagaggaacagactgtggaattatccactgaagttcagtcc
ttacacagagaaataaaggatgctaaagagcagctaagccctttggaaacaacactggaa
aaatttcagcaggagaaagaagaattaatcaacaaaaagaatacaagccacagaacagca
caagataaaataaatgaaatcaaagagaaggttaaaaatattcacagttacatgaaagac
attgagaattatattcaagatggaaaagatgactataagaagcaaaaagaaactgaactt
aataaagtaatagctcaactaagtgaatgcgataaacacaaagaaaagattaataaggaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggat
aaccttactttaagaaaaagaaatgaagaactaaaagaagttgaagaagaaagaaaacaa
catttgaaggaaatgggtcaaatgcaggttttacaaatgaaaaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tatgaggaagaaattattcattttaagaaagaacttcgagaacctcaatttcgggatgct
gaggaaaagtacagggaaatgatgattattatgagaacaacagagcttgtgaacaaggat
ctggacatctattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gagtacatagaaattcgatcagatgccgatgaaaatgtatcagcttctgataaaaggagg
aattacaactaccgagtggtgatgctaaagggagacacagccttggatatgagagggcgt
tgcagcgccggacaaaaggtattagcctcactcatcattcgcctagccctggctgaaaca
ttctgcttaaactgtggcatccttgctttggacgagccaacgacaaatcttgaccgagaa
aacattgaatctcttgcacatgctctggttgagataataaaaagtcgctcacaacagcgg
aacttccagcttctggtaatcactcatgatgaagattttgtggagctcctagggcgttct
gaatatgtggagaaattctacaggattaagaagaacattgagcagtgctcacagattgtg
acatgcagtgttagttccctaggatcttatgttcattaa
DBGET
integrated database retrieval system
