Bos taurus (cow): 789613
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Entry
789613 CDS
T01008
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bta
Bos taurus (cow)
Pathway
bta03082
ATP-dependent chromatin remodeling
bta04714
Thermogenesis
bta05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
789613 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
789613 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
789613 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bta03021
]
789613 (SMARCD2)
03036 Chromosome and associated proteins [BR:
bta03036
]
789613 (SMARCD2)
Transcription machinery [BR:
bta03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
789613 (SMARCD2)
Chromosome and associated proteins [BR:
bta03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
789613 (SMARCD2)
PBAF complex
789613 (SMARCD2)
GBAF(ncBAF) complex
789613 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
789613
NCBI-ProteinID:
NP_001192391
BGD-bta:
BT28896
Ensembl:
ENSBTAG00000021062
VGNC:
34994
UniProt:
E1BJD1
LinkDB
All DBs
Position
19:complement(48082271..48091877)
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTTGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gttgccgcggccctgggagcgccgcctccgccggcgggacccggcatgctgcccggaccg
gcgcttagggggcccgggccggctggaggcgtggggggccccggggccgctgccttccgc
cccatgggccccgcgggcccggcggcgcagtaccagcggcctggcatgtccccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgccggctccccctttggcacagct
gctccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctgctt
gtgcctcaggcccagcccccgatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgttccagagtctcaggcgtacatg
gacctcttggcttttgaacggaagctggaccagaccattgctagaaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaaacgaaagctgcggatctatatttccaat
acattcagtcccagcaaggcagaaggtgacactgcaggaaccacagggacccctggagga
acccctgcaggggacaaggtggcttcctgggaactccgagtagagggaaaactgctggac
gatcctagtaaacagaagcggaagttttcttccttctttaagagccttgtcatcgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagacggcttccaggtgaaacggcccggagacctgaacgtcaagtgcaccctc
ctgctcatgctggatcatcagccccctcagtacaagctggacccccgcctggcgaggctg
ctaggggtgcacacgcagacgagggctgccatcatgcaggccctgtggctctacatcaaa
cacaaccagctgcaggacggccacgagcgcgagtacatcaactgcaaccgctacttccgc
cagatcttcagctgcggccgactacgtttctctgagattcccatgaagctggcggggttg
ctgcagcatccagaccccattgtcatcaaccacgtcatcagcgtggaccctaacgaccag
aagaagacagcctgttacgacattgatgtggaggtggatgacccgctcaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagatcgcctcccttgatgtcaagatc
cacgagactattgagtccatcaaccagctgaagacccagagggatttcatgctcagtttt
agcactgacccccaggacttcatccaggagtggctccgttcccagcgccgggacctcaag
atcatcactgatgtgattgggaacccggaggaggagagacgagcagctttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaatccgcctgacctaa
DBGET
integrated database retrieval system
