Bemisia tabaci (sweet potato whitefly): 109029728
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Entry
109029728 CDS
T06019
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
btab
Bemisia tabaci (sweet potato whitefly)
Brite
KEGG Orthology (KO) [BR:
btab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
btab03036
]
109029728
Enzymes [BR:
btab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
109029728
Chromosome and associated proteins [BR:
btab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
109029728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Motif
Other DBs
NCBI-GeneID:
109029728
NCBI-ProteinID:
XP_018895856
LinkDB
All DBs
Position
Unknown
AA seq
1947 aa
AA seq
DB search
MEPADITINKREPITLGAIVNPSLIWACYPSGVNKRATSLKYQIDEELNEYFSNRLNRKS
VLPEDLEKHTHVSVKYEGSWFRGVVMDRRPDGPRELFSVLLVDVGVEIKDLTDDLIYPLP
QETQAHQIQAFLIALHGIEPLSVEVDISVGKTVLEPSQGWDPYQVRLFQNLLENHDEAFF
QTSIVKENVRHGTLYIIKNKGRINVNETLVQLNLAQNKNQAVDVSKHLIRNSSHYKFVIS
ILGREKQETRSKFNRSGTDCVGSPSASFKQSRARQLQTVEASEDNVTSEDGNKNNHSRER
NDCIEQSAESRAKTCIYPAGFQPISKKKKQPRSPRFGNLIHSTHNTSLGMEASTSVQQSL
PESSGNNLKLAKPIEIDLESNNKKTSTNESTNSLLYNKNEKELSGEEIKIASAKSSSKPK
GRIWNNVIAPCSQANDDKGASSSDEYDVELPSRKPCATIKAHEQEYKILSLYSKSLKRDS
TAVFSQSKDCNLIASSCSNAGAEDHFTKNDAMADKYLASYSFSNSSFSECDLPAAATSKS
INRVVNAPVLSNTVFENSHATPQIVSYASSTSSRGKTRLQLERERLAVSHQMSENTTETS
GGKGLIEGNVEAEFSDSSSQISASCCYNTENQWDTSVTSSRSGRRLLDNNSLANSMSEFE
DVSRKKQSEEFYLQSEKVLVHNIFDADVEAVKSFTDLDLHPVVKNACRRIGWTSFHRAQA
YAFPLILNWNDALIVGQPRTGKTISYVIPFVSCLHAGTSYHQLKTTNCPKVVIVCAWSVA
CEAVESKFKHLLGSFQHKIKVVKAYSCGKYKNPEKLVTLLNGCDVLITTPRYLLYLFNQD
KVIDFQHLHHFILDGCHDLFKHFEPEVLDICQKVSSMKLEGKKVQIVITSEVYNSVTEKL
LMNGFLFKPHVLIAKAMETAIYGKCTCKLIITDQENKIQSLLELLENFNARELKTVIVCN
PGNVDKLHKALERNDYYSEPVIDLNISDEHIGKSRRSMLRGKLEGVRCPVIVCTDDALVN
LQIADAHILIHFDLPIRKHAFSIRYISIFAHIPNRLVKNSEQNYCKTGVILGTDTSFEFL
QFLEFIKRSLQKIEVPQVAEDVAKAIFHRREEEEKRNRLICPRLLRFGECWPSPLSCPER
HVLIKDIDHPRLMPMKGYVKVKILHVLDASSYSARLLEVSEDSLMWSHHSRNYAVFATKL
NMHYMDESNCYSKDKPEVGDVVVYEHTPGDFKRAKVIEEFRMTSQHKPQEYRIKLIDEGL
IISSKVLGPNLLYCPTCFQEDPPYAITVYLCGLKPVDLDYSWNYYASSYIQQGIAKCQKP
EMNGYFFKGKILLALNSSLWLNPFDCQQYLENTKTYIVKFSIKNELLDSNFAVKNASHLP
NLYELCKNAKLPIPIYNLPNDEKRLVHVEEIKPQWAHLPLDGEKKSQSCHLKVYITHNNG
PDMVFVQLVKFNESLVKLHNDIEKHMLSNREVSRMNYNVGDFCVANFKGEAPNRWFRAQI
IDKPGNNMVTVFYVDYGQEDTLDLDQVANIQQEFITRLPFQAVECVLAALQPTTNNEWDD
AAACIIDEYMMDEEGVYKTMLVKTIRIECKAQRTGGRRYRVALHDLNNITYSVNQDLLDR
GFAKPMKNELLLLNQQQPSLSDDFTNEPEEEKEDDEDSSQVSSLSSTEVSEMSEIHNFSK
NYCQNFSKDDLEDFKSFAFEMFSRTLNRDRASFQIERKAPSPVYQSSETLIHKNSHDAIE
VNYSEKSDLRPAVPLGKFPLVLWHQTPSHLFLQVGLETEEYFIDWGDDFLTFRALYKPKI
STANLSNQEAEVHTVVQRGQPAEEQYQFSLTFCGIINPHDVEHCTKRFYVHIKLKKQGVG
MWQRLTQETYKLPWLKFNPNYMEDTSDEDINLKFGKHSRIIKSVDGFYGDYDEMEEDEDW
SKKSGQSTLQEAEARYDMPEDPHDPTS
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcagacatcaccatcaataagcgagagccgatcactcttggagccattgta
aatccaagcctgatatgggcctgctatccatcaggagtaaacaagagagctacttccttg
aaatatcaaattgacgaggagctgaacgagtacttttcgaaccggttaaatcgcaaatct
gttctcccagaagatcttgaaaaacatacacatgtttctgtgaaatatgaagggtcatgg
ttcagaggagtggtaatggacagaagaccagatgggccaagagaattattttcagtgctg
ttggttgatgttggtgttgaaattaaagacctaactgatgacttgatttatccactaccc
caagaaacccaagcacatcaaattcaggctttcttaatagctttgcacgggattgaacca
ctttcagttgaagttgacatcagcgttggcaaaactgtcttggagccctctcagggttgg
gacccgtaccaagttcgactttttcaaaatcttctggagaatcacgatgaagcttttttc
caaacatctattgtgaaagaaaatgtaaggcacggcactctgtacataattaaaaacaaa
ggtagaatcaatgtaaacgagactctagttcaactgaatcttgcgcagaacaagaatcaa
gcggtagatgtttccaaacatttaatccgaaacagcagccattataaatttgttataagc
atactcgggcgtgagaagcaagaaacaagatccaaattcaatcggagtggcacagattgt
gtaggatcaccaagtgcctccttcaaacaatcaagagccagacagcttcaaactgttgag
gcaagtgaagataatgtcacctctgaagatggtaataagaataatcactctcgtgagcgt
aatgattgtatagaacagtcggcagaaagtagagccaaaacctgtatttaccctgctggt
tttcaacccataagtaagaaaaaaaaacaaccaagatctcccagatttggaaacttaatt
cacagcacacataatacaagcttggggatggaagcaagtacctctgtgcaacaatctttg
cccgagtcgtcaggtaataatttaaaattagccaagccaattgaaattgatcttgaatcg
aataacaagaaaacctccacaaatgaaagcactaattcgttgctgtacaacaaaaatgag
aaagaattatcaggagaagaaattaaaatcgcttcagccaagtctagtagcaaaccgaag
ggtaggatatggaataatgtcattgctccttgtagtcaagctaacgacgataagggtgca
agtagtagtgatgaatatgatgttgaacttccttcaaggaaaccttgtgccactattaag
gcgcatgaacaggaatataaaatactgtcactgtatagtaaaagcctcaaaagagactca
acagcagttttttcacagtcaaaagactgtaatctcatcgcctcttcatgtagtaatgca
ggtgctgaagatcattttaccaaaaatgatgccatggctgacaaatacctagctagttac
agcttctcaaactcctccttctctgagtgtgatttgccagcagctgcaacctcgaaaagt
attaatagagttgttaatgctccagtgctatcaaacactgtgttcgaaaacagccatgca
actcctcagattgtctcctacgcctcaagtacctcaagcagaggaaaaacaagacttcaa
cttgaaagagaaagattagctgtgtctcatcagatgtcagagaatacaaccgagacctct
ggtggcaaaggtctcattgaagggaatgttgaagctgaattcagtgactcctcatcacag
atcagtgcttcttgttgttacaatactgaaaatcagtgggacacatctgttacaagtagt
agaagtggacgaagactcttggacaacaactctcttgctaattcaatgtccgagtttgaa
gacgtgtctcgaaagaagcagtctgaagaattctatttgcagtcagagaaagtgcttgtt
cataatatttttgatgctgacgttgaggctgtcaaatcttttacagaccttgatctccac
ccagttgtaaagaatgcttgtagaaggatcggttggacatcttttcacagagctcaagct
tatgcttttcccttgattctcaactggaatgatgctttaattgtcggtcaaccacgcact
ggtaaaactatatcttatgtaataccctttgttagctgtcttcatgctggcacttcgtat
catcagctgaagacgaccaattgccccaaggtggtcattgtttgtgcatggtcagttgct
tgtgaggcggtggaaagcaaatttaaacatcttttgggcagtttccaacacaaaataaaa
gtagtaaaagcctacagctgtggaaaatacaagaatccggaaaaattggttactctactg
aatggatgtgatgtgttgataaccactccaagatatttgctgtatcttttcaatcaagat
aaggttattgatttccaacacttacaccactttattctggatggatgtcatgacctcttc
aagcattttgagcccgaggttctagacatttgtcagaaagtttccagtatgaaattagaa
ggaaagaaagttcaaattgtcattacgtctgaagtatacaattcagttactgagaagtta
ttaatgaatggcttcttgttcaaacctcatgtgctcattgcaaaagcaatggaaacagct
atttacgggaagtgcacttgtaagcttatcatcacagatcaagaaaacaaaattcaatcg
ttgctcgagttgttggaaaattttaatgccagagaactaaaaactgtgattgtgtgcaac
cctggaaatgttgacaaattacataaagctctggaaagaaatgactattactctgaacct
gttatagacttgaacatcagtgatgagcacatcgggaagtctcgtcgatctatgctaaga
gggaagcttgaaggggttcgatgtcctgtcattgtgtgcacagacgatgctttagtgaat
ctgcagattgctgatgctcacatcctgattcatttcgatcttccaattaggaaacatgca
ttttctatccgttacatttctatttttgctcacatccccaaccgattagtaaaaaattca
gagcaaaactactgcaagacaggagtgatcttaggcactgatacttcttttgagtttctt
cagtttttggaatttatcaaaagatctttgcaaaagattgaagtccctcaagttgcggaa
gatgttgccaaagcaatctttcaccgaagagaggaggaagagaagaggaaccgtctcatc
tgtccccgccttctaaggtttggtgaatgttggccgtcacctttgtcctgccctgaacgc
cacgtcctgatcaaggatattgaccatcctcggttgatgccaatgaaaggttatgttaag
gtaaaaattttgcatgttttggatgcaagtagctattctgcaaggctcttggaggtctct
gaagactcgttaatgtggagtcatcattcgcgcaactacgcagtattcgcgacaaaactc
aacatgcattatatggacgagtctaactgctactcaaaagacaaaccagaagttggagat
gtggttgtctatgagcatacaccaggtgatttcaagagagccaaagtcatagaggagttc
aggatgacttcacaacacaagccccaagagtataggatcaagctaattgatgaaggcctt
ataatttccagcaaagttttggggccgaatcttctgtattgtcccacctgtttccaagaa
gatcctccgtatgctatcactgtgtacctttgcggtttgaaaccagtagatttagattac
tcatggaattattatgcctcatcttatattcaacaaggaatagcaaaatgccagaaacca
gagatgaatggctatttcttcaagggcaagattttattagccttaaactctagtttatgg
ctcaatccgtttgattgccagcagtaccttgaaaataccaaaacttacatagtaaagttc
tctatcaaaaacgaattattagatagtaacttcgctgtgaagaatgcttcacatttgcct
aatctgtacgaactgtgcaagaatgccaaacttccaatacctatctataatcttccaaat
gatgagaagagactggttcatgtggaagagataaaaccgcaatgggctcacttacccctt
gacggagaaaaaaaatcacaatcttgtcatctgaaggtgtatattacgcataacaatggt
ccagacatggttttcgttcaactagtcaagttcaatgagagtcttgtcaaacttcacaat
gatatagaaaaacacatgttatcaaatagagaagtttcgagaatgaattacaatgtcggt
gatttttgtgttgcaaactttaaaggagaagctccgaacagatggttccgagcgcagata
attgataagcctggcaataatatggtgacagtgttctatgttgattatggacaagaggat
actctggatctggatcaagtagcaaatatacagcaggaattcataactagactacctttt
caggctgtggagtgtgttttagcagcattgcagccaacgactaacaatgaatgggatgat
gctgcagcctgtattattgatgaatacatgatggatgaggaaggagtgtataagaccatg
ttagttaagacgattcgaattgaatgcaaagctcaacgaaccggaggtcgcagatacaga
gttgctctgcatgatttgaataacattacgtatagtgtcaatcaagatttattagaccgg
ggttttgccaagccaatgaaaaatgagcttttgcttctgaatcaacaacaaccttctctg
tctgatgatttcaccaatgaaccagaggaagagaaagaagatgatgaagattcttctcaa
gtatctagtctaagctctacagaggtctcggaaatgagtgagattcacaacttcagcaag
aattactgtcaaaatttttccaaagatgacttagaagatttcaagagctttgcctttgaa
atgttttcaaggacactaaatagagatcgagcctcctttcaaattgaaaggaaagcaccc
tcgccagtgtatcagtcatccgagactctcatacacaaaaacagtcatgatgccattgaa
gtcaactactcggagaaatcagacttgcgaccagcagtgcctttaggaaaatttccgctt
gttttatggcatcaaacaccatcacatttattcctacaagttggactggaaacagaagaa
tactttatagattggggtgatgactttttgacattcagggctttatataaaccaaaaata
tcaacagcaaatttaagcaaccaagaagcagaagtacatacagtagttcaaagaggacag
ccagcagaagagcagtatcaatttagcttgactttctgtggcattattaatccgcatgat
gttgaacactgtacgaaacgtttctatgtacacatcaagttgaagaaacaaggtgttggc
atgtggcaacgcttgacacaagaaacatacaaactgccatggttgaagttcaatcctaat
tacatggaagatacttcagatgaagatatcaacttaaaatttggcaagcacagccgtatc
atcaaatctgtagatgggttttatggagattacgatgaaatggaagaagatgaagattgg
tctaagaagtcagggcagtctactttacaagaagctgaggcacgctacgatatgccagaa
gaccctcatgatccaacatcttga
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integrated database retrieval system
